| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3877 |
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| Symbol | |
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| ID | 5871671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 4324694 |
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| End bp | 4325890 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641548999 |
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| Product | D-amino-acid dehydrogenase |
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| Protein accession | YP_001670103 |
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| Protein GI | 167034872 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAGC GGGTAACGGT AATCGGTGGC GGGGTGGTTG GCCTGGCAAC GGCCTACGCT
CTTGTTCGTG ACGGGTATTC GGTAGCGTTG ATCGAGGCGC GCGACAGCCT GGCGTCGGCC
ACCAGTTTTG CCAATGGCGG GCAATTGTCC TATCGGTATG TGGCGCCACT GGCCGATGCC
GGGGTGCCCT GGCAGGCACT GGGCTGGCTG CTGCAGGGCG AGTCGCCGCT GCGCCTGCGC
TTGCGCCTTG ACCCGGCGCA GTGGCGCTGG CTGCTGGCCT TTACCCTGGC TTGCCGGCGC
AGCGTCAATC GCCGTAATGC CGGGCAATTG CTGGAGCTGG CGTTGCACAG CCAGGCCGTT
CTGGGGCAAT GGCGCGAGGC GCAGAACCTG GGCGACTTTG CCTGGCGGCG CAACGGCAAG
CTGGTGGCTT TTCGCAGCGA GCGGGCCTTT GCCCATGGCC GAGCGCAGTT GACGGACCCT
GCCAGCCAGC GGGTTTTGGC GGCAGTCGAG CTGCGCGCGC TGGAGCCTGC ATTGGCGGGG
GCACCGTTTG TCGGTGGCGT GTTCACAGCG GATGAAGAGG TGGGTGATTG CCACTTGTTC
TGCCAGCGCC TGGAGGCCCT GTTACGCGCT TCGGGGCAAT GCCGTGTTCT GCTTGGTCGG
CCAGTGACGC AACTGGTGCG GTGCCAGGAC CAGGTTGTAG CGCTACAACT GGGCGACGAG
CAGATGGAGG TGGAGCAGTT GGTGCTATGC GCCGGGCATC GCGGCCCAGG CTTGGCACTA
CCGGGGGTGC ATATACCGGT CTACCCGCTG AAGGGCTACA GCCTGACGGC ACCGATCGGT
GCCGGGCACC AAGCCCCGGA AGTGAGCCTT ACCGATTATG AGCGCAAGAT CGTCTACGCC
CGCCTGGGGC AGCAGCTACG GGTAGCGGCG ATGGTGGACA TTGTCGGTTT TGACGAGTCG
GTGGAAAAGC GCAGGTTGCA GAGCATGCGG CGGCTGGCAC TTGAGACGTT ACCCAAGGCT
GCGGATTATA ACCAGGCGGT GGAGTGGGCC GGGATGCGGC CGGCGACACC GACCGGGGTG
CCGATCATTG GCGGGACGGT GTATCGCAAC TTGTGGCTGA ACCTGGGGCA TGGTGCGTTG
GGGTTTACCT TGGCCTGTGG CAGTGCGCAG CGCCTGGTCG AAATGATGGG GCGATAG
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| Protein sequence | MKQRVTVIGG GVVGLATAYA LVRDGYSVAL IEARDSLASA TSFANGGQLS YRYVAPLADA
GVPWQALGWL LQGESPLRLR LRLDPAQWRW LLAFTLACRR SVNRRNAGQL LELALHSQAV
LGQWREAQNL GDFAWRRNGK LVAFRSERAF AHGRAQLTDP ASQRVLAAVE LRALEPALAG
APFVGGVFTA DEEVGDCHLF CQRLEALLRA SGQCRVLLGR PVTQLVRCQD QVVALQLGDE
QMEVEQLVLC AGHRGPGLAL PGVHIPVYPL KGYSLTAPIG AGHQAPEVSL TDYERKIVYA
RLGQQLRVAA MVDIVGFDES VEKRRLQSMR RLALETLPKA ADYNQAVEWA GMRPATPTGV
PIIGGTVYRN LWLNLGHGAL GFTLACGSAQ RLVEMMGR
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