| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3876 |
|---|
| Symbol | |
|---|
| ID | 5871670 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 4323910 |
|---|
| End bp | 4324638 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641548998 |
|---|
| Product | Asp/Glu/hydantoin racemase |
|---|
| Protein accession | YP_001670102 |
|---|
| Protein GI | 167034871 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4126] Hydantoin racemase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTATTC TGATCGCCAA CGTCAACACC ACCGAAGCCA TCACCGACGC CATTGCCGAG
CAGGCCCGTG CGGTGGCTGC GCCCGGCACG GAAATAATCG GCCTCACACC TTGGTTTGGT
GCCGAGTCGG TGGAGGGCAA TTTCGAAAGC TACCTGGCTG CAATCGCGGT GATGGACCGA
GTACTGGCCT TCGAAGGCCC CTATGACGCC GTGATCCAGG CGGGTTATGG CGAACACGGC
CGCGAAGGTC TGCAGGAGCT GCTCAACGTG CCGGTGGTGG ACATTACCGA TGCTGCCGCC
AGCACAGCAA TGTACCTGGG CCATGCTTAT TCGGTTGTAA CCACGCTGGA CCGCACCGTA
CCGCTGATCG AGGACCGCCT GAAGCTGTCC GGCCTTTACG AGCGCTGCGC CTCGGTGCGT
GCCAGCGGGC TGGCGGTACT GGAACTGGAG GCCGACCCAC AGCGGGCCGT GGAGGCGATT
GTCGAGCAGG CCGAACGGGC CGTGCGTGAC GACAAGGCCG AAGTGATCTG CCTGGGTTGC
GGCGGCATGG CCGGGCTGGA CGAGCAGATT CGCCAGCGCA CCGGTGTGCC CGTGGTGGAT
GGTGTGAGCG CAGCGGTAAC CATTGCCGAA TCGCTGGTGC GCATGGGGTT GAGTACTTCC
AAGGTACGCA CCTATGCCAC GCCGCGCGCG AAAAAGGTGC TGGGTTGGCC GATGCGCTTC
GGCCGCTGA
|
|---|
| Protein sequence | MRILIANVNT TEAITDAIAE QARAVAAPGT EIIGLTPWFG AESVEGNFES YLAAIAVMDR
VLAFEGPYDA VIQAGYGEHG REGLQELLNV PVVDITDAAA STAMYLGHAY SVVTTLDRTV
PLIEDRLKLS GLYERCASVR ASGLAVLELE ADPQRAVEAI VEQAERAVRD DKAEVICLGC
GGMAGLDEQI RQRTGVPVVD GVSAAVTIAE SLVRMGLSTS KVRTYATPRA KKVLGWPMRF
GR
|
|---|
| |