| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3875 |
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| Symbol | |
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| ID | 5871669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4322361 |
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| End bp | 4323893 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641548997 |
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| Product | permease for cytosine/purines uracil thiamine allantoin |
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| Protein accession | YP_001670101 |
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| Protein GI | 167034870 |
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| COG category | [F] Nucleotide transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG1953] Cytosine/uracil/thiamine/allantoin permeases |
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| TIGRFAM ID | [TIGR00800] NCS1 nucleoside transporter family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.245681 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAGCA GCCTCGACCT TGCCCCTGAA CTATCCGTCG CCAGCACCCA CCCCAACACC
ACCCTCACCG GCAACGCGCC GGAACTTGCC CTGAGCCCGC GCCTGCATAA CCGCGACCTC
GCGCCAACAC GTATCGAAGG CCGTCGCTGG GGCGGCTACA GCATCTTCGC GCTGTGGACA
AACGATGTGC ACAATATCGC CAACTACTCG TTCGCCATGG GCTTGTTCGC CCTCGGCCTG
GGTGGCTGGC AAATTCTCTT GTCGTTGGCC ATCGGTGCGG CCCTGGTGTA TTTCTTCATG
AACCTGTCCG GCTACATGGG GCAGAAAACC GGGGTGCCGT TCCCGGTCAT CAGCCGCATT
GCCTTCGGTA TCCACGGCGC GCAGATCCCG GCGCTGATCC GCGCCGTCAT CGCCATTGCC
TGGTTCGGCA TCCAGACCTA CCTGGCCTCG GTGGTGCTGC GGGTACTGCT TACCGCCGTG
TGGCCACAAA TGGCGGCATA CGACCACGAC AGCATCCTCG GCCTGTCGAG CCTGGGCTGG
GTGTGCTTCG TATCGATCTG GCTGGTGCAA CTGGTCATCC TGGCCTACGG CATGGAGATG
GTGCGCCGCT ACGAGGCCTT TGCCGGCCCG GTGATCCTGC TGACCGTCGC CGCCCTGGCG
GTGTTCATGT ACTTCAAGGC CGATGCCCGC ATTGCCTGGT CGGTGGCTGC GCCGCTGACT
GGCTACGAGA TGTGGCGCAA CATTTTTGCC GGCGGCGCGC TGTGGCTGGC GATCTACGGC
ACTTTGGTGC TGAACTTCTG TGACTTCGCC CGCTCCTCGC CGTGCCGCAA GACCATCCGC
GTCGGCAACT TCTGGGGCCT GCCGGTGAAC ATCCTGGTGT TCGCCGTGAT CACCGTGGTG
CTATGCGGTG CGCAGTTCCA GATCAACGGC CAAATCATCG ACAGCCCGAC GCAGATCGTC
GCCGCCATCC CCAGCACGCC ATTTTTGGTG CTCGGCTGCC TGGCCTTCCT GATCGTCACC
GTGGCGGTGA ACATCATGGC CAACTTTGTC GCACCAGCCT TCGTGCTCAG CAACCTGGCG
CCGCGCCACC TGAACTTCCG CCGTGCCGGG CTGATCAGCG CCACGTTGGC GGTGCTGATC
CTGCCGTGGA ACCTGTACAA CAGCCCGCTG GTGATCGTGT ACTTCCTGTC GGGCCTGGGC
GCCCTGCTCG GCCCGCTGTA CGGGGTGATC ATGTCCGACT ACTGGTTGCT GCGCAAAGGC
TGCATCAACG TGCCACAGCT GTACAGCGAA GACCCGGCCG GCGCCTATCA CTACAGCAAA
GGCATCAACC TGCGCGCCGT GGCCGCCTTC GTGCCGGCTG CGCTGCTGGC CATCGTCCTG
GCCCTGGTCC CCAACTTCCA GAGCGTGGCG CCGTTCTCCT GGTTGATCGG CGCCGGTATC
GCCGCTGCCC TGTACCTGCT GATCGCACCC CGCAACCGCC AATACCACGA CGTCAGCGGC
GAGTGCATCG CCGTCGACCA CAGCAGCCAT TAA
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| Protein sequence | MSSSLDLAPE LSVASTHPNT TLTGNAPELA LSPRLHNRDL APTRIEGRRW GGYSIFALWT
NDVHNIANYS FAMGLFALGL GGWQILLSLA IGAALVYFFM NLSGYMGQKT GVPFPVISRI
AFGIHGAQIP ALIRAVIAIA WFGIQTYLAS VVLRVLLTAV WPQMAAYDHD SILGLSSLGW
VCFVSIWLVQ LVILAYGMEM VRRYEAFAGP VILLTVAALA VFMYFKADAR IAWSVAAPLT
GYEMWRNIFA GGALWLAIYG TLVLNFCDFA RSSPCRKTIR VGNFWGLPVN ILVFAVITVV
LCGAQFQING QIIDSPTQIV AAIPSTPFLV LGCLAFLIVT VAVNIMANFV APAFVLSNLA
PRHLNFRRAG LISATLAVLI LPWNLYNSPL VIVYFLSGLG ALLGPLYGVI MSDYWLLRKG
CINVPQLYSE DPAGAYHYSK GINLRAVAAF VPAALLAIVL ALVPNFQSVA PFSWLIGAGI
AAALYLLIAP RNRQYHDVSG ECIAVDHSSH
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