Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3865 |
Symbol | |
ID | 5871659 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 4310622 |
End bp | 4311896 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641548987 |
Product | hydroxypyruvate reductase |
Protein accession | YP_001670091 |
Protein GI | 167034860 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2379] Putative glycerate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.57883 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.36576 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGTCG ATCCGCAAAA ACTTCTCCGC GAACTGTTCG ACACAGCCAT CGCCGCCGCC CACCCCCGTC AAGTTCTCGA ACCCTACCTG CCCGCCGACC GTAGCGGCCG GGTCATCGTC ATCGGCGCCG GCAAGGCCGC AGCTGCCATG GCCGAAGTGG TCGAGAAAAG CTGGCAGGGC GAAGTCTCTG GCCTGGTCGT TACCCGTTAC GGCCACGGCG CCAACTGCCA AAAAATCGAA GTGGTCGAAG CCGCCCACCC GGTCCCGGAT GCCGCCGGCC TGGCCGTGGC CAAGCGCGTG CTGGAACTGG TCAGCAACCT CAACGAAGAC GACCGCGTCA TCTTCCTGCT GTCTGGCGGG GGCTCGGCAC TGCTGGCCCT GCCTGCCGAA GGCCTGACCC TGGCCGACAA GCAGCAGATC AACAAGGCGC TGCTCAAATC CGGCGCCACC ATCGGCGAGA TGAACTGCGT ACGCAAACAC CTCTCGGCGA TCAAAGGCGG CCGCCTGGCC AAGGCCTGCT GGCCGGCCAC CGTCTACACC TATGCCATTT CCGATGTACC GGGCGACCTC GCCACCGTGA TCGCTTCCGG CCCCACCGTG GCCGACCCGA GCACCTCGGC CGACGCCCTG GCCATTCTCA AACGCTACAA CATCGAAGCG CCGAAAGCGG TCATCGACTG GCTGAACAAC CCAGCCTCGG AAACCGTCAA GGCCGATGAC CCAGCCCTGG CCCGCAGCCA CTTCCAGCTG ATCGCCAAGC CCCAGCTGTC GCTCGAAGCT GCCGCGGTCA AAGCCCGCCA GGCCGGCTTC AGCCCGCTGA TCCTCGGTGA CCTGGAAGGT GAATCACGCG AAGTGGCCAA GGTACACGCC GGCATTGCCC GGCAAATCGT TCAACACGGC CAGCCGCTGA AGGCGCCCTG CGTGATCCTG TCGGGTGGCG AAACCACCGT AACTGTGCGC GGCAATGGCC GTGGCGGGCG CAACGCCGAG TTCCTGCTCA GCCTCACCGA AAGCCTGAAA GGCCTGCCGG GTGTGTACGC CCTGGCCGGC GACACCGACG GCATCGATGG CTCGGAAGAA AACGCCGGTG CCTTCATGAC CCCGGCCAGC TACGCCCGCG CCGAAGCCCT GGGCCTGTCG GCCAGCGACG AGTTGGACAA CAACAACGGC TATGGCTACT TCGCCGCGCT GGATGCGCTG ATCGTCACCG AGCCGACCCG CACCAACGTC AACGACTTCC GCGCCATCCT GATCCTCGAG ACTGCCCAAT CATGA
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Protein sequence | MSVDPQKLLR ELFDTAIAAA HPRQVLEPYL PADRSGRVIV IGAGKAAAAM AEVVEKSWQG EVSGLVVTRY GHGANCQKIE VVEAAHPVPD AAGLAVAKRV LELVSNLNED DRVIFLLSGG GSALLALPAE GLTLADKQQI NKALLKSGAT IGEMNCVRKH LSAIKGGRLA KACWPATVYT YAISDVPGDL ATVIASGPTV ADPSTSADAL AILKRYNIEA PKAVIDWLNN PASETVKADD PALARSHFQL IAKPQLSLEA AAVKARQAGF SPLILGDLEG ESREVAKVHA GIARQIVQHG QPLKAPCVIL SGGETTVTVR GNGRGGRNAE FLLSLTESLK GLPGVYALAG DTDGIDGSEE NAGAFMTPAS YARAEALGLS ASDELDNNNG YGYFAALDAL IVTEPTRTNV NDFRAILILE TAQS
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