Gene PputGB1_3865 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3865 
Symbol 
ID5871659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp4310622 
End bp4311896 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content65% 
IMG OID641548987 
Producthydroxypyruvate reductase 
Protein accessionYP_001670091 
Protein GI167034860 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2379] Putative glycerate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.57883 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.36576 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGTCG ATCCGCAAAA ACTTCTCCGC GAACTGTTCG ACACAGCCAT CGCCGCCGCC 
CACCCCCGTC AAGTTCTCGA ACCCTACCTG CCCGCCGACC GTAGCGGCCG GGTCATCGTC
ATCGGCGCCG GCAAGGCCGC AGCTGCCATG GCCGAAGTGG TCGAGAAAAG CTGGCAGGGC
GAAGTCTCTG GCCTGGTCGT TACCCGTTAC GGCCACGGCG CCAACTGCCA AAAAATCGAA
GTGGTCGAAG CCGCCCACCC GGTCCCGGAT GCCGCCGGCC TGGCCGTGGC CAAGCGCGTG
CTGGAACTGG TCAGCAACCT CAACGAAGAC GACCGCGTCA TCTTCCTGCT GTCTGGCGGG
GGCTCGGCAC TGCTGGCCCT GCCTGCCGAA GGCCTGACCC TGGCCGACAA GCAGCAGATC
AACAAGGCGC TGCTCAAATC CGGCGCCACC ATCGGCGAGA TGAACTGCGT ACGCAAACAC
CTCTCGGCGA TCAAAGGCGG CCGCCTGGCC AAGGCCTGCT GGCCGGCCAC CGTCTACACC
TATGCCATTT CCGATGTACC GGGCGACCTC GCCACCGTGA TCGCTTCCGG CCCCACCGTG
GCCGACCCGA GCACCTCGGC CGACGCCCTG GCCATTCTCA AACGCTACAA CATCGAAGCG
CCGAAAGCGG TCATCGACTG GCTGAACAAC CCAGCCTCGG AAACCGTCAA GGCCGATGAC
CCAGCCCTGG CCCGCAGCCA CTTCCAGCTG ATCGCCAAGC CCCAGCTGTC GCTCGAAGCT
GCCGCGGTCA AAGCCCGCCA GGCCGGCTTC AGCCCGCTGA TCCTCGGTGA CCTGGAAGGT
GAATCACGCG AAGTGGCCAA GGTACACGCC GGCATTGCCC GGCAAATCGT TCAACACGGC
CAGCCGCTGA AGGCGCCCTG CGTGATCCTG TCGGGTGGCG AAACCACCGT AACTGTGCGC
GGCAATGGCC GTGGCGGGCG CAACGCCGAG TTCCTGCTCA GCCTCACCGA AAGCCTGAAA
GGCCTGCCGG GTGTGTACGC CCTGGCCGGC GACACCGACG GCATCGATGG CTCGGAAGAA
AACGCCGGTG CCTTCATGAC CCCGGCCAGC TACGCCCGCG CCGAAGCCCT GGGCCTGTCG
GCCAGCGACG AGTTGGACAA CAACAACGGC TATGGCTACT TCGCCGCGCT GGATGCGCTG
ATCGTCACCG AGCCGACCCG CACCAACGTC AACGACTTCC GCGCCATCCT GATCCTCGAG
ACTGCCCAAT CATGA
 
Protein sequence
MSVDPQKLLR ELFDTAIAAA HPRQVLEPYL PADRSGRVIV IGAGKAAAAM AEVVEKSWQG 
EVSGLVVTRY GHGANCQKIE VVEAAHPVPD AAGLAVAKRV LELVSNLNED DRVIFLLSGG
GSALLALPAE GLTLADKQQI NKALLKSGAT IGEMNCVRKH LSAIKGGRLA KACWPATVYT
YAISDVPGDL ATVIASGPTV ADPSTSADAL AILKRYNIEA PKAVIDWLNN PASETVKADD
PALARSHFQL IAKPQLSLEA AAVKARQAGF SPLILGDLEG ESREVAKVHA GIARQIVQHG
QPLKAPCVIL SGGETTVTVR GNGRGGRNAE FLLSLTESLK GLPGVYALAG DTDGIDGSEE
NAGAFMTPAS YARAEALGLS ASDELDNNNG YGYFAALDAL IVTEPTRTNV NDFRAILILE
TAQS