Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3861 |
Symbol | |
ID | 5871655 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 4306105 |
End bp | 4306545 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641548983 |
Product | hypothetical protein |
Protein accession | YP_001670087 |
Protein GI | 167034856 |
COG category | [R] General function prediction only |
COG ID | [COG3193] Uncharacterized protein, possibly involved in utilization of glycolate and propanediol |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.636119 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCTT TGAACCTGAA AGTCGCTGTC AGCCTGGTGA ATGCCGCGTT GGCGGCGGGC CGCAAGATCA ATGCCGCGCC ACTGACCGTG GCGGTGCTGG ATGCCGGCGG GCACCTGCTG GCGCTGCAGC GTGAAGATGG CGCCAGCCTG ATTAGGCCTG AAGTGGCCGC TGGCAAAGCC TGGGGCGCAA TTGCCCTGGG CAAGGGCTCG CGGTTGCTGG CGCTGGATGC ACAGCAACGG CCGGCGTTTT TTGCCGCGCT GAACGGGATG GGGGAGCGGC CGGTGGTGCC AGCGCCGGGA GGCGTGCTGA TTCGTGATCA GGACGGCAAG GTGCTGGGTG CGGTAGGGAT CAGCGGCGAT ACGTCGGATA TCGACGAGCA GTGCGCGATC AGTGCGATCG AGGAGGTGGG GTTGCGGGCG GATGCCGGGG TAGCGGCGTA A
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Protein sequence | MNALNLKVAV SLVNAALAAG RKINAAPLTV AVLDAGGHLL ALQREDGASL IRPEVAAGKA WGAIALGKGS RLLALDAQQR PAFFAALNGM GERPVVPAPG GVLIRDQDGK VLGAVGISGD TSDIDEQCAI SAIEEVGLRA DAGVAA
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