| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3849 |
|---|
| Symbol | |
|---|
| ID | 5871643 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 4294086 |
|---|
| End bp | 4294439 |
|---|
| Gene Length | 354 bp |
|---|
| Protein Length | 117 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641548971 |
|---|
| Product | hydroxyisourate hydrolase |
|---|
| Protein accession | YP_001670075 |
|---|
| Protein GI | 167034844 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2351] Transthyretin-like protein |
|---|
| TIGRFAM ID | [TIGR02962] hydroxyisourate hydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.303786 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.620266 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGACGTT TGACCACACA CGTACTGGAT GCCGCGCATG GCTGCCCGGG CAGCTCGATC
AAGGTCGAGC TGTACCGTGT CGAAGGCCAG CAACTGGAGC TGGTGAATAC CGCCCTGACC
AACAGCGATG GCCGCGTCGA CGCGCCACTG CTGCAGGGTG ACGACTACCG CACTGGCGTT
TACCAGTTGC AGTTCAGCGC TGGCGATTAC TACCGCGCCC GCGGCGTGCA ACTGCCGGCC
CAGGCGTTTC TGGATGTTGT CGTGCTGCGC TTTGGTATCG ACGAGCAGCA GGAGCACTAC
CACGTGCCAC TGCTGATCTC GCCGTACAGC TATTCGACCT ATCGTGGAAG CTAG
|
|---|
| Protein sequence | MGRLTTHVLD AAHGCPGSSI KVELYRVEGQ QLELVNTALT NSDGRVDAPL LQGDDYRTGV
YQLQFSAGDY YRARGVQLPA QAFLDVVVLR FGIDEQQEHY HVPLLISPYS YSTYRGS
|
|---|
| |