| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3846 |
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| Symbol | |
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| ID | 5871640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 4290396 |
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| End bp | 4291094 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641548968 |
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| Product | aquaporin Z |
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| Protein accession | YP_001670072 |
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| Protein GI | 167034841 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
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| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.452606 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATGT CCCTCGGTAA ACGCATGGGT GCCGAACTGA TCGGTACCTT CTGGCTGGTG
CTTGGTGGCT GCGGCAGTGC GGTACTCGCA GCCAGTTCCC CTGTCGGCAT CGGCGTACTC
GGTGTTGCCT TCGCCTTCGG CCTCACCGTG CTGACCATGG CCTTCGCCAT CGGCCATATC
TCTGGCTGTC ACCTTAATCC TGCTGTGTCC TTTGGGCTGG TGGTGGGCGG GCGTTTTCCT
GCCAAAGAGC TGCTGCCCTA CGTGATTGCG CAAGTGATCG GCGCCATCCT GGCGGCAGGA
GTGATCTACC TCATCGCCAG CGGCAAGGCC GGTTTCGAAT TGTCCTCGGG GCTGGCGTCC
AACGGCTATG CCGACCATTC GCCCGGCGGC TACACGCTGG GGGCAGGCTT TGTCAGTGAA
GTGGTGATGA CGGCGATGTT CCTGGTGGTG ATCATGGGCG CGACCGATTC CCGCGCACCA
GCAGGCTTTG CGCCCATCGC CATCGGTCTG GCCCTGACCC TGATTCACCT GATCTCCATC
CCGGTGACCA ATACCTCGGT CAACCCCGCG CGCAGCACGG GGCCGGCATT GTTCGTTGGC
GGTTGGGCCT TGCAGCAGCT GTGGCTGTTC TGGGTGGCGC CGCTGATCGG TGCTGCAATC
GGCGGCGCGC TGTACCGGGG CCTGGCGAAA GAACCTTAG
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| Protein sequence | MSMSLGKRMG AELIGTFWLV LGGCGSAVLA ASSPVGIGVL GVAFAFGLTV LTMAFAIGHI
SGCHLNPAVS FGLVVGGRFP AKELLPYVIA QVIGAILAAG VIYLIASGKA GFELSSGLAS
NGYADHSPGG YTLGAGFVSE VVMTAMFLVV IMGATDSRAP AGFAPIAIGL ALTLIHLISI
PVTNTSVNPA RSTGPALFVG GWALQQLWLF WVAPLIGAAI GGALYRGLAK EP
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