Gene PputGB1_3833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3833 
Symbol 
ID5871626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp4271541 
End bp4271876 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content60% 
IMG OID641548955 
Producthypothetical protein 
Protein accessionYP_001670059 
Protein GI167034828 
COG category[S] Function unknown 
COG ID[COG0718] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00103] DNA-binding protein, YbaB/EbfC family 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.869154 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.493238 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAAG GTGGCATGGC CGGCCTGATG AAGCAGGCCC AGCAGATGCA GGAAAAGATG 
CAGAAGATGC AGGAAGAGCT GGCCAACGCC GAAGTCACCG GCCAGTCCGG TGGCGGTCTG
GTGAGCGTGG TGATGACCGG TCGTCACGAC GTCAAGCGCG TCAGCATCGA CCAGAGCCTG
ATGTCGACTG ATGAAGACGA CAAGGAAGTG CTGGAAGACC TGATTGCCGC TGCGTTGAAC
GACGCCGTGC GCAAGGTCGA GCAAAGCAGC CAGGAGAAGA TGGGCGGCAT GACCGCCGGC
ATGCAACTGC CGCCAGGCTT CAAGATGCCG TTCTAA
 
Protein sequence
MMKGGMAGLM KQAQQMQEKM QKMQEELANA EVTGQSGGGL VSVVMTGRHD VKRVSIDQSL 
MSTDEDDKEV LEDLIAAALN DAVRKVEQSS QEKMGGMTAG MQLPPGFKMP F