Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3833 |
Symbol | |
ID | 5871626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 4271541 |
End bp | 4271876 |
Gene Length | 336 bp |
Protein Length | 111 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641548955 |
Product | hypothetical protein |
Protein accession | YP_001670059 |
Protein GI | 167034828 |
COG category | [S] Function unknown |
COG ID | [COG0718] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00103] DNA-binding protein, YbaB/EbfC family |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 0.869154 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.493238 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAAAG GTGGCATGGC CGGCCTGATG AAGCAGGCCC AGCAGATGCA GGAAAAGATG CAGAAGATGC AGGAAGAGCT GGCCAACGCC GAAGTCACCG GCCAGTCCGG TGGCGGTCTG GTGAGCGTGG TGATGACCGG TCGTCACGAC GTCAAGCGCG TCAGCATCGA CCAGAGCCTG ATGTCGACTG ATGAAGACGA CAAGGAAGTG CTGGAAGACC TGATTGCCGC TGCGTTGAAC GACGCCGTGC GCAAGGTCGA GCAAAGCAGC CAGGAGAAGA TGGGCGGCAT GACCGCCGGC ATGCAACTGC CGCCAGGCTT CAAGATGCCG TTCTAA
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Protein sequence | MMKGGMAGLM KQAQQMQEKM QKMQEELANA EVTGQSGGGL VSVVMTGRHD VKRVSIDQSL MSTDEDDKEV LEDLIAAALN DAVRKVEQSS QEKMGGMTAG MQLPPGFKMP F
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