Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3832 |
Symbol | recR |
ID | 5871625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 4270794 |
End bp | 4271396 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641548954 |
Product | recombination protein RecR |
Protein accession | YP_001670058 |
Protein GI | 167034827 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0353] Recombinational DNA repair protein (RecF pathway) |
TIGRFAM ID | [TIGR00615] recombination protein RecR |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.539989 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTTCA GCCCCCTCAT TCGCCAACTG ATCGATGGTT TGCGCATCCT CCCAGGTGTC GGCCAGAAAA CCGCCCAGCG CATGGCCTTG CAGTTGCTCG AGCGAGACCG CAGCGGCGGC CTGCGCCTGG CCCAGGCGCT GACCCAGGCC ATGGAGGGGG TAGGCCATTG CCGCCAGTGC CGCACCCTGA CCGAGCAGGA GCTGTGCCCG CAATGCGCCG ACACGCGCCG TGACGATACC CAGTTGTGCG TGGTCGAGGG GCCGACCGAT GTGTATGCGG TGGAACAGAC GGGCTACCGT GGCCGTTACT TCGTACTCAA GGGCCACCTG TCGCCGCTGG ACGGCTTGGG GCCGGAGGCG ATCGGCATTC CGCAACTGAT GGCCCGCATC GAGGAGCAGG GCACCTTTAC CGAGGTGATC CTGGCGACCA ACCCGACGGT GGAGGGCGAG GCGACGGCGC ATTACATTGC GCAGTTGTTG AGCGAGAAGG GGTTGGCGGC AACGCGGATT GCCCATGGTG TGCCGCTGGG CGGCGAGCTT GAGCTGGTGG ATGGCGGGAC CTTGGCCCAT GCCATTGCAG GGCGCCGGCC TATTTCGCTC TGA
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Protein sequence | MSFSPLIRQL IDGLRILPGV GQKTAQRMAL QLLERDRSGG LRLAQALTQA MEGVGHCRQC RTLTEQELCP QCADTRRDDT QLCVVEGPTD VYAVEQTGYR GRYFVLKGHL SPLDGLGPEA IGIPQLMARI EEQGTFTEVI LATNPTVEGE ATAHYIAQLL SEKGLAATRI AHGVPLGGEL ELVDGGTLAH AIAGRRPISL
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