| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3829 |
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| Symbol | |
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| ID | 5871622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4267759 |
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| End bp | 4269141 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641548951 |
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| Product | coproporphyrinogen III oxidase |
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| Protein accession | YP_001670055 |
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| Protein GI | 167034824 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00538] oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.618416 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.919193 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGACG ACCTTCGTTG GGATACCGAC CTGATCCGCC GCTACGATCT GGCCGGGCCA
CGCTACACCT CCTACCCGAC CGCCATGCAA CTGCACAGCG AAGTGGGCTC GTTCGACCTG
CTCCACGCCC TGCGCGAGAG CCGTCGGGCC GTGCGTCCGC TGTCGCTGTA CGTGCACGTG
CCGTTCTGCG CCAACATCTG CTACTACTGC GCCTGCAACA AGGTCATCAC CAAGGACCGT
GCCCGTGCCG CGCCGTACCT GCAGCGCCTG GAGCAGGAGA TCCAGTTGAT CGCTTGCCAC
CTGGGGCCCA AGCAGCGTGT TGAGCAGTTG CATTTCGGCG GCGGCACGCC GACCTTCCTC
AGCCACGTGG AACTGCGCCA GCTGATGGCA ACCTTGCGCC AACACTTCCA CTTGCTGGAC
GACGACTCCG GCGACTATGG CATCGAGATC GACCCGCGGG AGGCCGATTG GTCGACCATG
GGCCTGCTCC GCGAGCTGGG CTTCAACCGC GTCAGCCTGG GCGTGCAGGA CCTCGACCCG
GCCGTGCAGC GCGCAGTCAA CCGCCTGCAG AGCCTGGAAC AAACCCGTAC ACTGATCGAG
GCTGCGCGCA CCCTGCAGTT CCGTTCGGTC AACCTGGACT TGATCTACGG CCTGCCCAAG
CAAACCCCGG AAGGTTTTGC GCGCACCGTC GAAGAAGTGA TCCGCCTGCA GCCCGACCGC
CTGTCGGTGT TCAACTACGC CCACCTGCCC GAGCGTTTCA TGCCCCAGCG GCGCATCGAC
AACAACGATC TGCCCAGCCC GGCTGCCAAG CTGGAGATGC TGCACGCCAC CATCGACCAG
TTGACCGCCG CTGGCTATCG CTACATCGGC ATGGATCACT TCGCCCTGCC GGATGACGAA
CTGGCCATCG CCCAGGAAGA AGGCACCCTG CAGCGCAACT TCCAGGGCTA CACCACTCAC
GGGCACTGCG ACCTGATCGG CCTGGGCGTG TCGGCGATCA GCCAGATCGG CGAGCTGTAC
TGCCAGAACA GCAGCGACCT CAACACCTAT CAGGACAGCC TGTCCAACGC CCAGCTGGCC
ACCCAGCGTG GCTTGCTGTG CAACCACGAC GACCGCATTC GCCGGGCGGT GATCCAACAA
CTGATCTGCC ATTTCGAGCT GGATTTCGAA CCGATCGAAC AGGCCTTCAC TATCGATTTT
CGCGGCTACT TCAACGACCT CTGGCCAGAG CTGCTGACCT TGCAGCGCGA TGGCCTGATC
AGCCTGGACA GCCAGGGCAT TCGCATCCTG CCGGCTGGCC GCCTGCTGGC GCGCTCGGTA
TGCATGGTGT TCGATGCCTA TCTGGCGATG CAAAACCGCC AACGTTTCTC GCGGGTGATC
TGA
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| Protein sequence | MLDDLRWDTD LIRRYDLAGP RYTSYPTAMQ LHSEVGSFDL LHALRESRRA VRPLSLYVHV
PFCANICYYC ACNKVITKDR ARAAPYLQRL EQEIQLIACH LGPKQRVEQL HFGGGTPTFL
SHVELRQLMA TLRQHFHLLD DDSGDYGIEI DPREADWSTM GLLRELGFNR VSLGVQDLDP
AVQRAVNRLQ SLEQTRTLIE AARTLQFRSV NLDLIYGLPK QTPEGFARTV EEVIRLQPDR
LSVFNYAHLP ERFMPQRRID NNDLPSPAAK LEMLHATIDQ LTAAGYRYIG MDHFALPDDE
LAIAQEEGTL QRNFQGYTTH GHCDLIGLGV SAISQIGELY CQNSSDLNTY QDSLSNAQLA
TQRGLLCNHD DRIRRAVIQQ LICHFELDFE PIEQAFTIDF RGYFNDLWPE LLTLQRDGLI
SLDSQGIRIL PAGRLLARSV CMVFDAYLAM QNRQRFSRVI
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