Gene PputGB1_3822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3822 
Symbol 
ID5871615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp4260751 
End bp4260948 
Gene Length198 bp 
Protein Length65 aa 
Translation table11 
GC content60% 
IMG OID641548944 
ProductCbb3-type cytochrome oxidase component 
Protein accessionYP_001670048 
Protein GI167034817 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4736] Cbb3-type cytochrome oxidase, subunit 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.337063 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.946608 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATCG GGATGATTCG CGGCCTGGGC ACCGTCGTGG TGATGGTGGC CTTCGTGGGC 
CTGGCGCTGT GGGTATTCAA CCCACGGCGT AAAAAGGACT TCGACGAAGC GACCCAACTG
CCCTTCGCGG ATGACCCCGA GGCCTGCCGC CACGTCGAGC AAGAGCACGC AAAAGCTTCT
GGGAGCAAAC AACAATGA
 
Protein sequence
MDIGMIRGLG TVVVMVAFVG LALWVFNPRR KKDFDEATQL PFADDPEACR HVEQEHAKAS 
GSKQQ