| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3815 |
|---|
| Symbol | |
|---|
| ID | 5871608 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 4254403 |
|---|
| End bp | 4255098 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641548937 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001670041 |
|---|
| Protein GI | 167034810 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3571] Predicted hydrolase of the alpha/beta-hydrolase fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 0.949374 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTAATG GGCAAAGTGC CGGTATTGAC GGGGATCAAT GGGCGAAGGT CGCAAATGTC
CCAGGCTTGC GCTGCGATCC TCCGCGCGTT CAGGGTAAAG ACGGCTACAA GGGCTGCCTG
ATCCTGGCCC ATGGCGCGGG TGCGCCGATG GACAGCGGGT TCATGGACGA CATGGCGCAA
AGGCTTGCGG CACTTGGGGT TGCGGTAGTG CGCTTCGAGT TCCCGTACAT GGCCGAGCGC
AGGGTTACCG GCGGCAAGCG GCCGCCCAAC CCACAGAAGG TGTTGCTGGA ATGCTGGCGC
GAGGTGTACC GGCAGGTGCG ACCTTTGGTC GCGGGCAAGC TGGCCGTGGG CGGCAAGTCC
ATGGGTGGGC GCATGGCGAG CCTGTTGGCC GACGAGTTGG GCACGGACGC GCTGGTGTGC
CTGGGCTATC CGTTCTACGC GGTGGGTAAA CCCGAAAAGC CACGGGTGGA GCATTTGGCA
GCGTTGAAGA CCCCGACCTT GATCGTGCAG GGCGAGCGGG ATGCGCTGGG TAACCGCGAG
GCGGTGGCGG GGTATGCGTT GTCGCCGGCG ATCGAGGTGA GCTGGCTAAC GGCGGGGGAC
CATGACTTGA AGCCGTTGAA GGCCTCGGGG TTCAGCCATG AGCAGCATTT GCAGGCGGCG
GCGCAGCGAG TGGCCAGTTT CTTGGCAGGC ATATGA
|
|---|
| Protein sequence | MINGQSAGID GDQWAKVANV PGLRCDPPRV QGKDGYKGCL ILAHGAGAPM DSGFMDDMAQ
RLAALGVAVV RFEFPYMAER RVTGGKRPPN PQKVLLECWR EVYRQVRPLV AGKLAVGGKS
MGGRMASLLA DELGTDALVC LGYPFYAVGK PEKPRVEHLA ALKTPTLIVQ GERDALGNRE
AVAGYALSPA IEVSWLTAGD HDLKPLKASG FSHEQHLQAA AQRVASFLAG I
|
|---|
| |