Gene PputGB1_3797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3797 
Symbol 
ID5871590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp4224581 
End bp4225552 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content66% 
IMG OID641548919 
Producthypothetical protein 
Protein accessionYP_001670023 
Protein GI167034792 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1975] Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.410951 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.629316 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGCATC TCGATCTTCA GGTGATCCGG CAGGCCTTGC AGTGGTCGTG CAACGGCCAG 
CGGGTGTGGT TATGCACGGT GCTCGCCACC TATGGTTCGG CGCCCCGCGC GCCGGGCTCG
CTGCTGGCGG TGAATGCCAG CGGCCAGTGG CTGGGGTCGT TGTCCGGTGG CTGCGTCGAA
GACGACTTCC TGGAACGTGT AGCCCTGGGT GAATTCCCGG AGCCGGTGGC CATCGTGCGT
TACGGCGACG GCAGCGACTC GCGTTCGAGC ATTCGCTTGC CGTGTGGTGG CGTGCTTGAG
GTTTTGGTGG AGAACCTGCC GGCCGAGTGC GAGGTGCAGG CGCACCTGCG TGAGCTGGAA
AGCGCACTGC AGGGCCAGCG CCGGGTGCTG CGCGAAGTAC GCCTGCCCGA GGGCTTGCGT
CAGTTGGCCG ACGACCACAG CCAGGGCCCG CGTGTCGAGC GTGAACGCGA CCGCGTGCGC
CTGCGCGTGG GGGCCGCCCA GCGCCTGCTG CTGGCCGGCT ACTCCAGCGT CGCGCATTTT
TGCGCCGAAT TCGGTAAAGG GATGGGGTTT GAGGTCATCC TGTGCGACCC ACGCGACGAA
GTGCTCGACG GCGTGGTGCT GGACGGCATC GAGGTGCGCC GTGAACTGCC GTCGGAATTT
ATCGCCAACG GCGGTTGCCA TGCCGACACG GCGGTGGTTG CATTGACCCA TGATCCGAAA
ATCGATGACC TGGCCATGCT TGAAGCGGTG CGTACCGAAG CGTTCTACAT CGGCGTGATG
GGCTCCAAGG CCACCTCCGA CAAGCGTCGT GAACGCTTGC AGCGCATTGG TGGCCTGTGC
TCCGACGAGC TGGCGCGCAT TCATGCGCCG ATTGGCCTGA ACCTGGGCAG CAAGACCCCG
GCTGAAATCG CCCTGGCGGT ACTGGCCGAT ATCCTGCGCC TGCGCAACGG CATCGGGCGG
GCTGCGCTGT GA
 
Protein sequence
MQHLDLQVIR QALQWSCNGQ RVWLCTVLAT YGSAPRAPGS LLAVNASGQW LGSLSGGCVE 
DDFLERVALG EFPEPVAIVR YGDGSDSRSS IRLPCGGVLE VLVENLPAEC EVQAHLRELE
SALQGQRRVL REVRLPEGLR QLADDHSQGP RVERERDRVR LRVGAAQRLL LAGYSSVAHF
CAEFGKGMGF EVILCDPRDE VLDGVVLDGI EVRRELPSEF IANGGCHADT AVVALTHDPK
IDDLAMLEAV RTEAFYIGVM GSKATSDKRR ERLQRIGGLC SDELARIHAP IGLNLGSKTP
AEIALAVLAD ILRLRNGIGR AAL