Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3797 |
Symbol | |
ID | 5871590 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 4224581 |
End bp | 4225552 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641548919 |
Product | hypothetical protein |
Protein accession | YP_001670023 |
Protein GI | 167034792 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1975] Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.410951 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.629316 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAGCATC TCGATCTTCA GGTGATCCGG CAGGCCTTGC AGTGGTCGTG CAACGGCCAG CGGGTGTGGT TATGCACGGT GCTCGCCACC TATGGTTCGG CGCCCCGCGC GCCGGGCTCG CTGCTGGCGG TGAATGCCAG CGGCCAGTGG CTGGGGTCGT TGTCCGGTGG CTGCGTCGAA GACGACTTCC TGGAACGTGT AGCCCTGGGT GAATTCCCGG AGCCGGTGGC CATCGTGCGT TACGGCGACG GCAGCGACTC GCGTTCGAGC ATTCGCTTGC CGTGTGGTGG CGTGCTTGAG GTTTTGGTGG AGAACCTGCC GGCCGAGTGC GAGGTGCAGG CGCACCTGCG TGAGCTGGAA AGCGCACTGC AGGGCCAGCG CCGGGTGCTG CGCGAAGTAC GCCTGCCCGA GGGCTTGCGT CAGTTGGCCG ACGACCACAG CCAGGGCCCG CGTGTCGAGC GTGAACGCGA CCGCGTGCGC CTGCGCGTGG GGGCCGCCCA GCGCCTGCTG CTGGCCGGCT ACTCCAGCGT CGCGCATTTT TGCGCCGAAT TCGGTAAAGG GATGGGGTTT GAGGTCATCC TGTGCGACCC ACGCGACGAA GTGCTCGACG GCGTGGTGCT GGACGGCATC GAGGTGCGCC GTGAACTGCC GTCGGAATTT ATCGCCAACG GCGGTTGCCA TGCCGACACG GCGGTGGTTG CATTGACCCA TGATCCGAAA ATCGATGACC TGGCCATGCT TGAAGCGGTG CGTACCGAAG CGTTCTACAT CGGCGTGATG GGCTCCAAGG CCACCTCCGA CAAGCGTCGT GAACGCTTGC AGCGCATTGG TGGCCTGTGC TCCGACGAGC TGGCGCGCAT TCATGCGCCG ATTGGCCTGA ACCTGGGCAG CAAGACCCCG GCTGAAATCG CCCTGGCGGT ACTGGCCGAT ATCCTGCGCC TGCGCAACGG CATCGGGCGG GCTGCGCTGT GA
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Protein sequence | MQHLDLQVIR QALQWSCNGQ RVWLCTVLAT YGSAPRAPGS LLAVNASGQW LGSLSGGCVE DDFLERVALG EFPEPVAIVR YGDGSDSRSS IRLPCGGVLE VLVENLPAEC EVQAHLRELE SALQGQRRVL REVRLPEGLR QLADDHSQGP RVERERDRVR LRVGAAQRLL LAGYSSVAHF CAEFGKGMGF EVILCDPRDE VLDGVVLDGI EVRRELPSEF IANGGCHADT AVVALTHDPK IDDLAMLEAV RTEAFYIGVM GSKATSDKRR ERLQRIGGLC SDELARIHAP IGLNLGSKTP AEIALAVLAD ILRLRNGIGR AAL
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