Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3791 |
Symbol | |
ID | 5871584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 4219138 |
End bp | 4220460 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641548913 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001670017 |
Protein GI | 167034786 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.467629 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCTGC GGGTACGCCT GAGCCTGATC CTCGGCAGTG CCTTCGTGAT CATCTGGGTG CTGGCCGCCG CGTGGATGCT GCGGGACTTG CGCCAGCAAA TGATGTTTTC CCTCGACCAG CGCCTGGTGG CCTCGGCGCG CATGGTCGCC GGGCTGATCG ACCAGCTGCC GCAGCCGCTG ACCGCCAAGG GCGGGGAGGC GCACTTTTCC GCCGACCAGT TCAGCGTACC GGACGGCATG GCTTGCCAGG TCAGCTCGCT GCGCGGCGAG ATCCTCGCCA GCAACCACAA GCACGATGGC GCCATGGACG ACGAGCGCAG TGGTTTCCGT GACCAGACCA TCGACGATGC GCTGTGGCGC ACCTTCACCT ACAACCATGG CGATGTGCGC ATCACTACCG CCGACCGGCA CATGGAACGC GAAGCGCTGA ACCAGTCGAT TCTGCTGGCC GCTTCGGCGC CGGTGCTGAT GGCCCTGCTC GGCAGCCTGG GGCTGCTGTG GATTGGCCTG GGCAAGGGCC TGGAGCCGCT CAACCGCATG CGTGATGCGT TGCGCCGAAG GCGCGCGGAC AGTGTCGAGC CGCTGCAGGT GGCGGGCATG CCCAGCGAGT TGCAGCCATT GTTGGAAACC CAGAACCAGT TGTTCCTGCG TATTGCCCAG ACCATCGAGC GCGAGCGGCG CCTGACCGAC GATGCCGCGC ATGAGCTGCG CAGCCCGCTG ACCGCGATCA AGACCCATCT GCAGGTGGCC CGCATGACCG ACGGTGCCGT ACGCGAACAG GCGCTGGAGC ATGCCGAGCA GGGCACCGAC CGCATGCATC GCACGCTGGA GCAGTTGCTG ATGCTGGCGC GCGTGGAAGG CAGCCTGTCG TTCGAGGATG GCGTGCAGTG CAGCGCCGAA CAGGTGGCGC GGCAGGCGGT GCAGGATGCC GGTGGCGGCG ACAACCGACG CATCGTGTTG CGCCTGCCGG AAGAGGCGAC GCAAATCTAC CTGGGCATGC CGGCACCCTT GGCCGTAGCA GCGCTGCGCA ACCTGCTGGA CAACGCCCTG CGCCATGGCG GCGAAGCGGC GGTGGAGCTG GACGTTCAGA TGGCTGACGG CCAGGTGGGC TTCATGGTAC GCGACCATGG GCCGGGGATT GCCGAGGCGG ATCTGGAGCA TCTGACCGAG CGCTTCTGGC GCAATGGGCA GAGTGGTGGC TGTGGGTTGG GGCTGGCGAT CGTGCAGGCG ATCGTGCAGC GTTGTGCCGG TAGCCTGCGG TTCGACAGCC GTAGCGATGG GTTGCGGGTA CTGTTGCAAG TACCGGCGCG TTCGGTGCAT TGA
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Protein sequence | MSLRVRLSLI LGSAFVIIWV LAAAWMLRDL RQQMMFSLDQ RLVASARMVA GLIDQLPQPL TAKGGEAHFS ADQFSVPDGM ACQVSSLRGE ILASNHKHDG AMDDERSGFR DQTIDDALWR TFTYNHGDVR ITTADRHMER EALNQSILLA ASAPVLMALL GSLGLLWIGL GKGLEPLNRM RDALRRRRAD SVEPLQVAGM PSELQPLLET QNQLFLRIAQ TIERERRLTD DAAHELRSPL TAIKTHLQVA RMTDGAVREQ ALEHAEQGTD RMHRTLEQLL MLARVEGSLS FEDGVQCSAE QVARQAVQDA GGGDNRRIVL RLPEEATQIY LGMPAPLAVA ALRNLLDNAL RHGGEAAVEL DVQMADGQVG FMVRDHGPGI AEADLEHLTE RFWRNGQSGG CGLGLAIVQA IVQRCAGSLR FDSRSDGLRV LLQVPARSVH
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