Gene PputGB1_3791 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3791 
Symbol 
ID5871584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp4219138 
End bp4220460 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content67% 
IMG OID641548913 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001670017 
Protein GI167034786 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.467629 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGC GGGTACGCCT GAGCCTGATC CTCGGCAGTG CCTTCGTGAT CATCTGGGTG 
CTGGCCGCCG CGTGGATGCT GCGGGACTTG CGCCAGCAAA TGATGTTTTC CCTCGACCAG
CGCCTGGTGG CCTCGGCGCG CATGGTCGCC GGGCTGATCG ACCAGCTGCC GCAGCCGCTG
ACCGCCAAGG GCGGGGAGGC GCACTTTTCC GCCGACCAGT TCAGCGTACC GGACGGCATG
GCTTGCCAGG TCAGCTCGCT GCGCGGCGAG ATCCTCGCCA GCAACCACAA GCACGATGGC
GCCATGGACG ACGAGCGCAG TGGTTTCCGT GACCAGACCA TCGACGATGC GCTGTGGCGC
ACCTTCACCT ACAACCATGG CGATGTGCGC ATCACTACCG CCGACCGGCA CATGGAACGC
GAAGCGCTGA ACCAGTCGAT TCTGCTGGCC GCTTCGGCGC CGGTGCTGAT GGCCCTGCTC
GGCAGCCTGG GGCTGCTGTG GATTGGCCTG GGCAAGGGCC TGGAGCCGCT CAACCGCATG
CGTGATGCGT TGCGCCGAAG GCGCGCGGAC AGTGTCGAGC CGCTGCAGGT GGCGGGCATG
CCCAGCGAGT TGCAGCCATT GTTGGAAACC CAGAACCAGT TGTTCCTGCG TATTGCCCAG
ACCATCGAGC GCGAGCGGCG CCTGACCGAC GATGCCGCGC ATGAGCTGCG CAGCCCGCTG
ACCGCGATCA AGACCCATCT GCAGGTGGCC CGCATGACCG ACGGTGCCGT ACGCGAACAG
GCGCTGGAGC ATGCCGAGCA GGGCACCGAC CGCATGCATC GCACGCTGGA GCAGTTGCTG
ATGCTGGCGC GCGTGGAAGG CAGCCTGTCG TTCGAGGATG GCGTGCAGTG CAGCGCCGAA
CAGGTGGCGC GGCAGGCGGT GCAGGATGCC GGTGGCGGCG ACAACCGACG CATCGTGTTG
CGCCTGCCGG AAGAGGCGAC GCAAATCTAC CTGGGCATGC CGGCACCCTT GGCCGTAGCA
GCGCTGCGCA ACCTGCTGGA CAACGCCCTG CGCCATGGCG GCGAAGCGGC GGTGGAGCTG
GACGTTCAGA TGGCTGACGG CCAGGTGGGC TTCATGGTAC GCGACCATGG GCCGGGGATT
GCCGAGGCGG ATCTGGAGCA TCTGACCGAG CGCTTCTGGC GCAATGGGCA GAGTGGTGGC
TGTGGGTTGG GGCTGGCGAT CGTGCAGGCG ATCGTGCAGC GTTGTGCCGG TAGCCTGCGG
TTCGACAGCC GTAGCGATGG GTTGCGGGTA CTGTTGCAAG TACCGGCGCG TTCGGTGCAT
TGA
 
Protein sequence
MSLRVRLSLI LGSAFVIIWV LAAAWMLRDL RQQMMFSLDQ RLVASARMVA GLIDQLPQPL 
TAKGGEAHFS ADQFSVPDGM ACQVSSLRGE ILASNHKHDG AMDDERSGFR DQTIDDALWR
TFTYNHGDVR ITTADRHMER EALNQSILLA ASAPVLMALL GSLGLLWIGL GKGLEPLNRM
RDALRRRRAD SVEPLQVAGM PSELQPLLET QNQLFLRIAQ TIERERRLTD DAAHELRSPL
TAIKTHLQVA RMTDGAVREQ ALEHAEQGTD RMHRTLEQLL MLARVEGSLS FEDGVQCSAE
QVARQAVQDA GGGDNRRIVL RLPEEATQIY LGMPAPLAVA ALRNLLDNAL RHGGEAAVEL
DVQMADGQVG FMVRDHGPGI AEADLEHLTE RFWRNGQSGG CGLGLAIVQA IVQRCAGSLR
FDSRSDGLRV LLQVPARSVH