| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3781 |
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| Symbol | |
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| ID | 5871574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4205021 |
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| End bp | 4206244 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641548903 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001670007 |
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| Protein GI | 167034776 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTGA CCCTGGCTAC GCATACCCAC ACCCCTTGGC TGGATGTCTG CATGAGACCT
TTAACCAACA CCCGTCGCCG TGTGCTGCTC ACTGGCCTGG GCCTGCTCGG CCTCGGCAGC
CTGCTGGCCT GGAAGGCGCT GCCCTATGGC GCGCAGCCGC TGAGCACCGT CGCCGTAACC
CGCGCCGACA TCGAAAGCAG CGTGACCGCG CTGGGCACCT TGCAACCGCG ACGTTACGTG
GACGTTGGCG CCCAGGCCTC CGGGCAGATC CACAAGCTGC ACGTTGAAGT CGGCGACAGT
GTGCGCAAAG GCCAGTTGCT GGTCGAGATC GACCCTTCCA CCCAGCAGGC GCGGCTGGAT
GCCGGGCGCT TCTCGATCGA CAACCTCAAG GCCCAGCTGG CCGAACAACG CGCGCAGTAC
CTGTTGGCCC AGCAGCAGCT CAAGCGCCAG CGCGACCTGG CCGCCGCCGG CGCCACCCGA
GACGAAGACG TGCAAACCGC CGCCGCGCAG TTGAAAGTCA CCCAGGCGCG CATCGACATG
TTCCTGGCGC AGATCCGCCA GGCCCAGGCC AGCCTGCGCA GCGACGAAGC CGAGTTAGGC
TACACGCGCA TCTACGCGCC CATGGACGGC ACGGTGGTGG CAGTGGATGC CCGCGAGGGG
CAAACCCTCA ACGCCCAGCA GCAAACCCCA TTGATCCTGC GCATCGCCAA GCTTTCGCCA
ATGACCGTGT GGGCCCAGGT GTCAGAGGCC GACATCGGCA AGGTCAAACC GGGCATGACC
GCCTATTTCA CCACCCTGGC CGGCGGCAAA CGCCGCTGGA CCAGCACCGT GCGGCAAGTG
CTGCCAATCC CGCCCAAGCC CCTGGAGCAG GCCAGCCAGG GCGGCGGCAG CCCGGCCAGC
GTCAGCAATG GCAGCGCCGG CAGCCAGGTG GTGCAGTACA GCGTGCTGCT GGATGTCGAC
AACCCGGACG GCGCGCTGAT GGCCGAGATG ACCACGCAAG TGTTCTTCGT TGCAGGCACC
GCCAGCCAGG TGCTGACCGT GCCGCTGGCC GCGCTGGATG ACGGCGACGG CCTGCGCCTG
GCGCGTGTGC TGACCGGCGA CGGCAAGGTG GAACAGCGCC AGGTGCGCAC CGGGCTCAGC
GACCGTTTGC GGGTACAGGT GCTGGACGGC CTGAGCGAAG GCGAGCGCCT GGTCATCGGC
GCCCCCGCCG TGAGTGGAGG CTGA
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| Protein sequence | MRLTLATHTH TPWLDVCMRP LTNTRRRVLL TGLGLLGLGS LLAWKALPYG AQPLSTVAVT
RADIESSVTA LGTLQPRRYV DVGAQASGQI HKLHVEVGDS VRKGQLLVEI DPSTQQARLD
AGRFSIDNLK AQLAEQRAQY LLAQQQLKRQ RDLAAAGATR DEDVQTAAAQ LKVTQARIDM
FLAQIRQAQA SLRSDEAELG YTRIYAPMDG TVVAVDAREG QTLNAQQQTP LILRIAKLSP
MTVWAQVSEA DIGKVKPGMT AYFTTLAGGK RRWTSTVRQV LPIPPKPLEQ ASQGGGSPAS
VSNGSAGSQV VQYSVLLDVD NPDGALMAEM TTQVFFVAGT ASQVLTVPLA ALDDGDGLRL
ARVLTGDGKV EQRQVRTGLS DRLRVQVLDG LSEGERLVIG APAVSGG
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