| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3761 |
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| Symbol | sdhB |
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| ID | 5871554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 4187338 |
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| End bp | 4188042 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641548883 |
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| Product | succinate dehydrogenase iron-sulfur subunit |
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| Protein accession | YP_001669987 |
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| Protein GI | 167034756 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
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| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.30038 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGAAAG TCGAAGTTTA TCGTTACAAC CCGGACACCG ACTCGGCACC AAAAATGGAG
TCGTTCGACG TCGATACCGG CGGCAAGGAC CTGATGGTGC TGGACGTATT GGCACTGATC
AAGGAAAAGG ACGAAGGTTT CTCGTACCGT CGCTCCTGCC GTGAAGGCGT TTGCGGTTCC
GATGGCATGA ACATGAACGG CAAGAACGGC CTGGCCTGCA TCACCCCGCT GTCGGCGGTG
GTGAAGGGCG GCAAGCTGGT TCTGCGCCCG CTGCCAGGCC TGCCGGTCAT TCGTGACCTG
GTGGTCGATA TGAGCATCTT CTACAAGCAG TACGAGAAGG TGAAGCCATT CCTGCAGAAC
GATACCCCGG CACCGGCCAT CGAGCGCCTG CAGTCGCCGG AAGATCGTGA CAAGCTGGAC
GGCCTGTACG AGTGCATCCT GTGCGCGTGC TGCTCGACTT CCTGCCCGTC GTTCTGGTGG
AACCCGGACA AGTTCCTGGG CCCGGCTGCA CTGCTGCAGG CCTACCGTTT CCTGGCCGAC
AGCCGCGATA CCAAGACTCA GGAGCGCCTG GCGTCCCTGG ATGACCCGTT CAGCGTATTC
CGCTGCCGCG GGATCATGAA CTGCGTAAAC GTTTGCCCGA AAGGTCTGAA CCCGACCAAG
GCAATCGGTC ACGTACGTAA CATGCTGCTG CAAAGCGGCA CCTGA
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| Protein sequence | MLKVEVYRYN PDTDSAPKME SFDVDTGGKD LMVLDVLALI KEKDEGFSYR RSCREGVCGS
DGMNMNGKNG LACITPLSAV VKGGKLVLRP LPGLPVIRDL VVDMSIFYKQ YEKVKPFLQN
DTPAPAIERL QSPEDRDKLD GLYECILCAC CSTSCPSFWW NPDKFLGPAA LLQAYRFLAD
SRDTKTQERL ASLDDPFSVF RCRGIMNCVN VCPKGLNPTK AIGHVRNMLL QSGT
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