Gene PputGB1_3754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3754 
Symbol 
ID5871547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp4176592 
End bp4177341 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content58% 
IMG OID641548876 
Producthypothetical protein 
Protein accessionYP_001669980 
Protein GI167034749 
COG category[S] Function unknown 
COG ID[COG3821] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.527223 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTCA TCCAAAGCAA CCTCAACAAC CTGCTGGCCG TGGCTTGGTT CGCCCTATGC 
TGGGGAGGTT ATACCCGCTA TGCCATCTGG AAGGGCCGTG ACACCGCATG CCTGGCCAGC
GTGCTGCACC TGTACCGCGA AGACTGGATG CGCCGCATGC TGCTGCGCGA CAATCGCATC
GCCGATGCCA GCGTAATCGG TAACCTCGAG CGCAACGCGT CGTTCTTTGC GTCCAGTACC
CTGATCATTC TCGCCGGTAT CCTTACCGTG CTTGGAGCGT CCGACCGGGC GCTGTCGTTG
CTGGCCGACT TGCCGCTGGT GCAGCAGACC TCTCAAGGCA TGTCGGAGAT CAAGTTGCTG
TGCCTGGCCA CGGTGTTTGT CTACGCCTTC TTCACCTTCA GCTGGTGTAT GCGCCAATAC
AACTTCGCCG CCGTACTGGT GGGTTCGGCA CCGATGATCG GCGAGCGGCT GGTCAATGAG
CTGGAGCGCA AGGCATTCGC TTCACGGGCG GCTCGGGTAT TGTCGTTGGC AGCTAACCAA
TTCAACCTGG GTTTGCGTTC GTATTACTTC GGCATGGCGA TGTTGAGCTG GTTCATCAGC
CCATGGCTGT TCATGGCCAT GAGTGTCGGG GTAGTGCTTA TTCTGTACCG GCGAGAGTTC
CATTCGGATG TGCTGGATGT GATGGTGTTC ACACCTACCG AAAGTGTCAC CAACGAGCCG
GTCAAAGAAA GTACTGCTGC CAGCAACTGA
 
Protein sequence
MNFIQSNLNN LLAVAWFALC WGGYTRYAIW KGRDTACLAS VLHLYREDWM RRMLLRDNRI 
ADASVIGNLE RNASFFASST LIILAGILTV LGASDRALSL LADLPLVQQT SQGMSEIKLL
CLATVFVYAF FTFSWCMRQY NFAAVLVGSA PMIGERLVNE LERKAFASRA ARVLSLAANQ
FNLGLRSYYF GMAMLSWFIS PWLFMAMSVG VVLILYRREF HSDVLDVMVF TPTESVTNEP
VKESTAASN