| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3741 |
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| Symbol | gpsA |
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| ID | 5871534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 4162203 |
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| End bp | 4163228 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641548863 |
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| Product | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase |
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| Protein accession | YP_001669967 |
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| Protein GI | 167034736 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0240] Glycerol-3-phosphate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.327803 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAAC AGCAACCTGT TGCAGTTCTG GGAGGCGGCA GCTTCGGCAC CGCCGTGGCG
AACCTGCTGG CGGAAAACGG TGTGCCAGTG CGCCAATGGA TGCGCGACCC GGCGCAGGCC
GAGGCCATGC GCGTCAATCG CGAGAATCCG CGCTACCTCA AGGGCATCCG CCTGCACGAT
GGCGTCGAAC CGGTCAACGA CCTGCTCGCT ACCCTGCAGG CCAGCGAGTT GGTCTTCGTG
GCCCTGCCAT CGAGCGCGTT GCGCAGCGTG CTGGCACCGC ATGCCGAGTT GCTGCGCGGC
AAGGGCCTGG TCAGCCTGAC CAAAGGCATC GAAGCGCAAA GCTTCAAACT GATGAGCCAG
ATACTTGAAG AAATCGCCCC CCAGGCGCGT ATTGGCGTGT TGTCGGGGCC CAACCTGTCG
CGCGAGATCG CCGAACACGC ACTGACTGCC ACAGTGGTGG CCAGTGAAGA CGAAAAGCTG
TGCCAGCAGG TGCAGGCCGT GCTGCACGGG CGTACCTTCC GCGTCTACGC CAGTGCCGAC
CGTTTTGGCG TCGAACTGGG CGGGGCGCTG AAGAACGTCT ACGCGATCAT TGCCGGCATG
GCCGTGGCCT TGGGGATGGG CGAGAACACC AAGAGCATGC TGATTACTCG GGCCTTGGCT
GAAATGACGC GCTTTGCTGT CAGCCAAGGT GCCAACCCCA TGACCTTCCT CGGCCTGGCC
GGTGTCGGTG ACCTGATCGT CACCTGCTCC TCGCCCAAGA GCCGCAACTA TCAGGTTGGC
TACGCGCTGG GCGAGGGGCA CAGCCTGGAA GAGGCGGTCA ACCGCCTGGG CGAAGTGGCC
GAAGGGGTCA ACACGCTAAA GGTGCTCAAG GCCAAGGCTC AGGAAGTGCA GGTGTACATG
CCGCTGGTGG CTGGCCTGCA TGCCATTCTG TTCGAAGGGC GCACCTTGAA CCAAGTGATC
GAGCACCTGA TGCGTGCCGA GCCCAAAACC GATGTCGACT TCATTTCCAT CAGCGGTTTC
AACTGA
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| Protein sequence | MTEQQPVAVL GGGSFGTAVA NLLAENGVPV RQWMRDPAQA EAMRVNRENP RYLKGIRLHD
GVEPVNDLLA TLQASELVFV ALPSSALRSV LAPHAELLRG KGLVSLTKGI EAQSFKLMSQ
ILEEIAPQAR IGVLSGPNLS REIAEHALTA TVVASEDEKL CQQVQAVLHG RTFRVYASAD
RFGVELGGAL KNVYAIIAGM AVALGMGENT KSMLITRALA EMTRFAVSQG ANPMTFLGLA
GVGDLIVTCS SPKSRNYQVG YALGEGHSLE EAVNRLGEVA EGVNTLKVLK AKAQEVQVYM
PLVAGLHAIL FEGRTLNQVI EHLMRAEPKT DVDFISISGF N
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