| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3722 |
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| Symbol | |
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| ID | 5871515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4139007 |
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| End bp | 4140614 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641548844 |
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| Product | ABC transporter related |
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| Protein accession | YP_001669948 |
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| Protein GI | 167034717 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4172] ABC-type uncharacterized transport system, duplicated ATPase component |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00680128 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAAC AGAACCTGAT CGAAGTGCGC GATCTGGCGG TGGAGTTTGT CACCGGCGAC
CAGGTCAACC GGGTGGTGGA CGGCATCAGC TTCGACATCC GCAAGGGCGA GACACTGGCC
CTGGTGGGCG AGAGTGGCTC GGGCAAATCG GTCACCGCGC ACTCGATCCT GCGCCTGCTG
CCCTACCCGC TGGCCCGTCA CCCCAGCGGC AGCATCCGCT ACGAGGGCAA GGACCTGCTG
CAGCAAAACG AGAAGACCCT GCAGCGCATT CGCGGCAACC GCATTGCGAT GATCTTCCAA
GAGCCGATGA CCTCGCTGAA CCCGCTGCAT TGCATCGAGA AGCAGATCAA CGAAATCCTC
CTGCTGCACA AGGGCCTGAC CGGCAAGGAA GCGACTGCCC GCACCCTGGA GCTGCTGGAG
CTGGTCGGCA TCCCCGAGCC GCGCAAGCGC CTCAAGGCCC TGCCCCACGA ACTGTCTGGC
GGGCAGCGCC AGCGAGTGAT GATTGCCATG GCGTTGGCCA ACGAGCCAGA GCTGCTGATT
GCCGACGAAC CGACCACGGC GCTGGATGTG ACCGTGCAGT TGAAGATTCT CGACCTGCTC
AAGGAACTGC AGGCACGCCT GGGCATGGCG CTGCTACTGA TCAGCCATGA CCTGAACCTG
GTACGCCGCA TCGCCCACCG CGTGTGCGTG ATGCAGCGCG GGCAGATCGT GGAACAGGCT
GAATGCGCCA CACTGTTCAG CGCCCCGCAG CACCACTACA CGCAGATGCT GATCAATGCC
GAGCCCAGCG GGCTGCCAGC GCACAACCCG GTCGGGGCGC CGCTGCTGGA GGTGGATGAC
CTCAAGGTAT GGTTCCCGAT CAAAAAGGGC TTTTTGCGGC GTACGGTCGA CCATGTGAAG
GCGGTGGACG GGGTCAACTT CAGCTTGCCG CAGGGGCAGA CACTGGGCAT TGTCGGCGAG
TCCGGGTCGG GCAAGTCCAC GTTGGGCCTG GCGATCTTGC GGCTGATTTC CAGCCAGGGC
GGCATTCGCT TCCATGGGCA GAACCTCGAA GGGCTGAACC AGAAAGCCGT GCGCCCGCTG
CGGCGTGAGA TGCAGGTGGT GTTCCAGGAC CCATTCGGCA GCCTTAGCCC GCGCATGTGC
GTGGCGGACA TTGTCGGTGA AGGGCTGCGC ATTCACGGTA TTGGCAACGC GCAGGAACAG
GAAACGGCGA TTATTGCGGC GCTGGAGGAA GTGGGGCTAG ACCCAAGGAC TCGGCATCGC
TACCCGCATG AGTTTTCCGG TGGGCAGCGC CAGCGTATTG CCATTGCCCG GGCGCTGGTG
TTGAAGCCGG CGCTGATTCT GCTGGATGAG CCTACCTCCG CGCTGGACCG CACGGTGCAG
CGGCAGGTGG TGGAGCTACT ACGCAATCTG CAGCAGAAGT ACAACCTGAC GTACCTGTTC
ATCAGCCATG ACCTGGCGGT GGTGAAGGCG CTGAGCCACC AGTTGATGGT GATCAAACAT
GGGCATGTTG TTGAACAAGG TGATGCGCAG GCGATATTCC ATGCGCCGCA ACATCCGTAT
ACGCGGCAGC TGCTGGAAGC GGCGTTCCTG GAGGTTGAGG CTTCGTAG
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| Protein sequence | MSEQNLIEVR DLAVEFVTGD QVNRVVDGIS FDIRKGETLA LVGESGSGKS VTAHSILRLL
PYPLARHPSG SIRYEGKDLL QQNEKTLQRI RGNRIAMIFQ EPMTSLNPLH CIEKQINEIL
LLHKGLTGKE ATARTLELLE LVGIPEPRKR LKALPHELSG GQRQRVMIAM ALANEPELLI
ADEPTTALDV TVQLKILDLL KELQARLGMA LLLISHDLNL VRRIAHRVCV MQRGQIVEQA
ECATLFSAPQ HHYTQMLINA EPSGLPAHNP VGAPLLEVDD LKVWFPIKKG FLRRTVDHVK
AVDGVNFSLP QGQTLGIVGE SGSGKSTLGL AILRLISSQG GIRFHGQNLE GLNQKAVRPL
RREMQVVFQD PFGSLSPRMC VADIVGEGLR IHGIGNAQEQ ETAIIAALEE VGLDPRTRHR
YPHEFSGGQR QRIAIARALV LKPALILLDE PTSALDRTVQ RQVVELLRNL QQKYNLTYLF
ISHDLAVVKA LSHQLMVIKH GHVVEQGDAQ AIFHAPQHPY TRQLLEAAFL EVEAS
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