| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3720 |
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| Symbol | |
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| ID | 5871513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4136911 |
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| End bp | 4137984 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641548842 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001669946 |
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| Protein GI | 167034715 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4174] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.00285143 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGCCT ACATCCTGCG CCGCCTGCTG CTGATCATCC CGACCCTATT CGGCATCCTC
ATCATCAACT TCATCATCGT TCAGGCCGCC CCCGGCGGCC CGGTCGAGCA GATGATCGCC
AAGCTCGAAG GCTTCGAAGG CGCGACCAGC CGCATCGCCG GTGGCGGCGC CGAGGTTTCC
GTGGCCGGTT CCAACTACCG CGGTGCACAG GGCCTGGACC CGGCGCTGAT CGCTGAAATC
GAGCGCATGT ACGGCTTCGA CAAGTCGCCG CCCGAGCGCC TGTGGATCAT GATCAAGAAC
TACGCCCAGC TCGACTTTGG CGACAGCTTC TTCCGCGATG CCAAGGTCAT CGACCTGATC
ATCGAGAAGA TGCCAGTGTC GATCTCGCTA GGGCTGTGGA GCACGCTGAT CATGTACCTG
GTGTCGATCC CGCTGGGCAT CGCCAAGGCG GTGCGCCATG GCAGCCACTT CGACGTGTGG
ACCAGTTCGG CGATTATCGT CGGCTACGCC ATCCCGGCGT TCCTGTTCGC TATCCTGCTG
ATCGTGCTGT TTGCCGGCGG CAGCTACTTC GACTGGTTCC CGCTGCGTGG CCTCACCTCC
AACAACTTCG ATGAGCTGAG TACCACCGGT AAAGTACTGG ATTACTTCTG GCACCTGGTG
TTGCCGATCA CCGCGCTGGT CATTGGCAAC TTCGCCACCA TGACCCTGCT GACCAAGAAC
AGCTTCCTCG ACGAAATCAA CAAACAATAC GTGGTCACCG CCAAGGCCAA AGGCTTGAAC
CGGTCACGGG TGCTGTACGG CCACGTGTTC CGCAACGCCA TGCTGTTGGT GATCGCCGGT
TTCCCCTCGG CGTTCATCGG CATCTTCTTC ACCGGCTCCT TGCTGATCGA GGTGATCTTC
AGCCTTGACG GCCTGGGCCT GATGAGTTTC GAGGCGGCCA TCAACCGCGA CTACCCGGTG
GTCTTCGGCA CCCTGTTCAT CTTCACCCTG CTGGGGCTGG TGGTGAAACT GATCGGCGAC
CTGACCTACA CCCTGGTCGA CCCACGCATC GACTTCGCCA GCCGGGAGCA CTGA
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| Protein sequence | MLAYILRRLL LIIPTLFGIL IINFIIVQAA PGGPVEQMIA KLEGFEGATS RIAGGGAEVS
VAGSNYRGAQ GLDPALIAEI ERMYGFDKSP PERLWIMIKN YAQLDFGDSF FRDAKVIDLI
IEKMPVSISL GLWSTLIMYL VSIPLGIAKA VRHGSHFDVW TSSAIIVGYA IPAFLFAILL
IVLFAGGSYF DWFPLRGLTS NNFDELSTTG KVLDYFWHLV LPITALVIGN FATMTLLTKN
SFLDEINKQY VVTAKAKGLN RSRVLYGHVF RNAMLLVIAG FPSAFIGIFF TGSLLIEVIF
SLDGLGLMSF EAAINRDYPV VFGTLFIFTL LGLVVKLIGD LTYTLVDPRI DFASREH
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