| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3718 |
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| Symbol | |
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| ID | 5871511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4133305 |
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| End bp | 4135077 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641548840 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001669944 |
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| Protein GI | 167034713 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.357391 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGAGCG AAAGCCACGG ATACGCGCAG TTCGGCACGC TCAAGTACCC AGCCACCTTC
ACCCACTTCG ACTGGGTCAA CCCGCAAGCG CCCAAGGGCG GCACCTTGCG GGCCATGGCT
TTTGGCACCT TCGATACCCT CAACCCCTAC ACCTTCAAGG GGTCGAGCCC TATAACCACG
CCCAATTTCC AGCAGTACGG CATCAGCGAG CTAAACGAGC CGCTAATGGT CGGCACCGGC
CTGTACGACC CGTCCGGTGA CGAGCCCACC TCCAGTTATG GCCTGATCGC CCGCTCGGTG
GAGTACAGCG AGGACCGCAG CTGGGTGGTG TTCAACCTGC GCCCGGAAGC CCGCTGGCAT
GACGGCCAGC CGATAACCTC GGCCGACGTG GCCTTCTCCT ACCGCACGCT GCTCAAGGAC
GGCCACCCGA TCTACCGCAC CAACCTGCAG GAAGTACAAC GGGTGGACAT CCTGGGCCCG
CTGCGCATCC GCTTCGTGTT CAAACGCGCC GGCAACCCGC TGCTGATCCT GCGCCTGGGC
GAAATGCCGG TGCTGCCCAA GCACTATTGG CAAAAGCGCG ACTTCAAGGC CACCACCTTC
GAGCCCCCCC TGGGCAGCGG CCCCTACCGC ATCACCCAGG TACAACCCGG GCGCCGGCTG
GTGTTCGAAC GGGTGAAGAA CTACTGGGGC AAGGACCTGG CGGTCAACCG TGGCAAGTAC
AATTTCAAGC GGGTGGAATA CGAGTTCTAC CGCGACGCCA CCGTGGCCTT CGAAGCGTTC
AAGGCTGGTG AATTCGACAT CTACATCGAG CACCAGGCAA AAAACTGGGC CAACGGTTAC
AACTTCCCTG CCGTGCGCCG TGGCGAGGTG ATCAAGGCAC AAATCCCGCA CAGCATCCCC
ACGCAAACCC AGGGCCTGTT CATGAACAGC CGCCGGGCCA CATTCAGCGA CCCGCGGGTA
CGCCAGGCGT TGGGGCTGAT GCTCGACTTC GAATGGACCA ACCGCGCACT GTTCAGCAGC
GCCTACCGCC GCTCAACCAG CTACTACCCC AACAGCGAAT TCGCCGCCAG CGGCCTGCCC
ACCGGCAAAG AGTGGCTGCT GCTGGCGCCA TTCCGGGACC AGTTGCCCGC CAAACTGTTC
AGCGAACCCT ACAAGGTCAG CCACACCGAT GGCCGTGGCA TCAGCCGCCA GACCCTACGC
CAGGCCCTGG GCCTGCTCGC CGAGGCCGGC TGGAAGCTGA ACGGCCAGCG CCTGGTCGAC
AGCAAAGGCC AGCAACTGCG CATGGAGCTG CTGCTGGTAA ACCCCAACCT TGAACGCATC
CTGCAACCTT ATGTCGAAAA TCTGTCCAGC ATCGGCATCG ATGCGCGCTT GCGCACCGTG
GACCGTGCCC AGTACAAACA ACGCCTGGAC CAGTTCGATT TCGACATGAT TCTGATGACC
CTGAACCAAA CCCTGAGCCC CGGCCTCGAA CAATGGCTGT ACTTCCATTC CAGCCAGGCC
GCGACCAAGG GCAGCAAGAA CTATGCTGGG GTCAAGGACC CGGTGGTCGA CCACCTGCTC
GACACCTTGC TCGCCGCCCG CACCCGCGAT GACCAGGTCG CCGCCGCCCG TGCCCTGGAC
CGCGTGCTCT CATGGCAGTA CTACATGATC CCCAACTGGT ACCTCGACAA TCACCGCCTG
GCCTACCGCA ACCGGTTCGC CTTCGTCACC ACGCCGCCCT ACACCCTTGG GCTGAACAGC
TGGTGGATCA AGACTTCGGA GAAAGCCCAA TGA
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| Protein sequence | MVSESHGYAQ FGTLKYPATF THFDWVNPQA PKGGTLRAMA FGTFDTLNPY TFKGSSPITT
PNFQQYGISE LNEPLMVGTG LYDPSGDEPT SSYGLIARSV EYSEDRSWVV FNLRPEARWH
DGQPITSADV AFSYRTLLKD GHPIYRTNLQ EVQRVDILGP LRIRFVFKRA GNPLLILRLG
EMPVLPKHYW QKRDFKATTF EPPLGSGPYR ITQVQPGRRL VFERVKNYWG KDLAVNRGKY
NFKRVEYEFY RDATVAFEAF KAGEFDIYIE HQAKNWANGY NFPAVRRGEV IKAQIPHSIP
TQTQGLFMNS RRATFSDPRV RQALGLMLDF EWTNRALFSS AYRRSTSYYP NSEFAASGLP
TGKEWLLLAP FRDQLPAKLF SEPYKVSHTD GRGISRQTLR QALGLLAEAG WKLNGQRLVD
SKGQQLRMEL LLVNPNLERI LQPYVENLSS IGIDARLRTV DRAQYKQRLD QFDFDMILMT
LNQTLSPGLE QWLYFHSSQA ATKGSKNYAG VKDPVVDHLL DTLLAARTRD DQVAAARALD
RVLSWQYYMI PNWYLDNHRL AYRNRFAFVT TPPYTLGLNS WWIKTSEKAQ
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