| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3714 |
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| Symbol | rnhA |
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| ID | 5871507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 4129349 |
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| End bp | 4129795 |
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| Gene Length | 447 bp |
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| Protein Length | 148 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641548836 |
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| Product | ribonuclease H |
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| Protein accession | YP_001669940 |
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| Protein GI | 167034709 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0328] Ribonuclease HI |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.246358 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGATA GCGTCGAGAT GTTTACTGAT GGTGCCTGCA AGGGCAACCC AGGCCCTGGT
GGCTGGGGCG TCCTGATGAT CTACAAGGGC GTCGAGAAGG AACTGTGGGG CGGCGAACGT
GAGACCACCA ACAACCGCAT GGAGCTGATG GCCGCGATTC AGGGCCTGAT GTCGCTGAAG
CGCGAATGCG AGGTGGTGCT GACCACCGAC TCGCAGTACG TGATGAAAGG CATCAACGAG
TGGATGGTGA ACTGGAAGAA GCGCGGCTGG AAGACGGCGG CCAAGGAACC GGTGAAGAAC
GCCGACCTGT GGCAGCAGCT TGATGAGCAG GTCAACCGCC ACAAGGTGAC CTGGAAGTGG
GTGCGCGGCC ACATCGGCCA CCCCGGCAAC GAGCGCGCCG ACCAGCTGGC CAACCGTGGG
GTCGATGAGG TACGCGCCCA GCGTTGA
|
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| Protein sequence | MSDSVEMFTD GACKGNPGPG GWGVLMIYKG VEKELWGGER ETTNNRMELM AAIQGLMSLK
RECEVVLTTD SQYVMKGINE WMVNWKKRGW KTAAKEPVKN ADLWQQLDEQ VNRHKVTWKW
VRGHIGHPGN ERADQLANRG VDEVRAQR
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