| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3708 |
|---|
| Symbol | |
|---|
| ID | 5871501 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 4122654 |
|---|
| End bp | 4122902 |
|---|
| Gene Length | 249 bp |
|---|
| Protein Length | 82 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641548831 |
|---|
| Product | LuxR family transcriptional regulator |
|---|
| Protein accession | YP_001669935 |
|---|
| Protein GI | 167034704 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.235669 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGACA ACGCTCGATA CTCGCAGCAA CCCCCGGCGG ACGCCCCGGT GCGTCTGACG
CCTCGTGAAC GGCAGGTCCT GTTGTGGTGT GCCTACGGCA AGAGTTCGTG GGAGATCGGC
CGGATTCTTG ACTGCAAGGA GTCGACGGTG AACTTCCACG TGTCCAACAT CCTGCGCAAA
TTCGATGTGC CTACCCGCGT GGTAGCGGTG ATCAAAGCCA TTCGCTACGG CTTGCTGGCC
GAGCAATGA
|
|---|
| Protein sequence | MTDNARYSQQ PPADAPVRLT PRERQVLLWC AYGKSSWEIG RILDCKESTV NFHVSNILRK
FDVPTRVVAV IKAIRYGLLA EQ
|
|---|
| |