Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3698 |
Symbol | |
ID | 5871491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 4114761 |
End bp | 4115309 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641548821 |
Product | NADH dehydrogenase subunit I |
Protein accession | YP_001669925 |
Protein GI | 167034694 |
COG category | [C] Energy production and conversion |
COG ID | [COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) |
TIGRFAM ID | [TIGR01971] NADH-quinone oxidoreductase, chain I |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.380267 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAAGT ATATCGGCGA CATCGTTAAG GGCACCGGCA CACAGCTGCG CAGCCTGGCC ATGGTGTTCT CCCACGGGTT TCGCAAGCGC GACACCCTGC AGTACCCCGA AGAGCCCGTG TACCTGCCGC CGCGCTACCG CGGCCGCATC GTCCTTACCC GCGACCCCGA TGGCGAGGAG CGCTGCGTAG CGTGCAACCT CTGCGCGGTG GCCTGCCCGG TTGGCTGCAT TTCGCTGCAG AAGGCCGAGA CCGAGGACGG CCGCTGGTAC CCGGAGTTCT TCCGCATCAA CTTCTCGCGT TGCATTTTCT GCGGCCTGTG TGAAGAAGCG TGCCCGACCA CCGCGATCCA GCTGACCCCG GATTTCGAAA TGGCCGAGTT CAAGCGTCAG GACCTGGTGT ACGAGAAAGA AGATCTGCTG ATCTCCGGCC CCGGCAAGAA CCCTGACTAC AACTTCTACC GTGTTGCGGG TATGGCGATC GCTGGCAAGC CGAAGGGCTC TGCACAGAAC GAAGCCGAGC CGATCAACGT GAAGAGCTTG CTCCCATAA
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Protein sequence | MFKYIGDIVK GTGTQLRSLA MVFSHGFRKR DTLQYPEEPV YLPPRYRGRI VLTRDPDGEE RCVACNLCAV ACPVGCISLQ KAETEDGRWY PEFFRINFSR CIFCGLCEEA CPTTAIQLTP DFEMAEFKRQ DLVYEKEDLL ISGPGKNPDY NFYRVAGMAI AGKPKGSAQN EAEPINVKSL LP
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