| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3693 |
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| Symbol | |
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| ID | 5871486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4107255 |
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| End bp | 4109036 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641548816 |
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| Product | bifunctional NADH:ubiquinone oxidoreductase subunit C/D |
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| Protein accession | YP_001669920 |
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| Protein GI | 167034689 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7
[COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
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| TIGRFAM ID | [TIGR01961] NADH (or F420H2) dehydrogenase, subunit C
[TIGR01962] NADH dehydrogenase I, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.210857 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCGG ACAACGCTAT TTTCATTCCG CCCTACAAGG CTGACGACCA AGATGTGGTC
GTCGAACTGA ACAACCGTTT TGGCGCCGAA GCATTCGTCG CCCAGGAAAC CCGCACCGGC
ATGCCCGTGC TGTGGGTCAA ACGCGCCCAG CTCAAAGAGG TGCTCAGCTT CCTGCGCGGT
GTCGCCAAGC CTTACAGCAT GCTGTACGAC CTGCACGGCG TGGACGAACG CCTGCGCACC
CAGCGCCGTG GCCTGCCGGC CGCCGACTTC AGCGTGTTCT ACCACCTGTT GTCGGTCGAG
CGTAACAGCG ACGTGATGAT CAAGGTGTCG CTCAGCGAAG GCGACCTGAA CCTGCCGACC
GTGACCGGTA TCTGGCCAAA CGCCAACTGG TACGAGCGCG AAGTGTGGGA CATGTTCGGC
ATCGACTTTG CCGGCCACCC GCACCTCAGT CGCATCATGA TGCCGCCGAC CTGGGAAGGT
CACCCGCTGC GCAAGGACTA CCCAGCCCGC GCCACCGAGT TCGACCCCTA CAGCCTGACC
CTGGCCAAGC AGCAGCTTGA AGAGGAATCG GCGCGTTTCA ACCCGGAAGC CTGGGGCATG
AAGCGTCAGG GCGCCAACGA GGACTACATG TTCCTCAACC TCGGCCCCAA CCACCCCTCG
GCGCACGGTG CGTTCCGTAT CGTCCTGCAG CTGGACGGTG AAGAGATCGT CGACTGCGTA
CCGGACATCG GCTACCACCA CCGTGGCGCC GAGAAAATGG CCGAGCGCCA GTCCTGGCAC
AGTTTCATCC CCTACACCGA CCGCATCGAC TACCTCGGCG GGGTGATGAA CAACCTGCCG
TACGTACTGG CAGTGGAAAA ACTCGCCGGC ATCAAAGTGC CGCAAAAAGT CGACGTGATT
CGCATCATGC TCGCCGAGTT CTTCCGCATC ACCAGCCACC TGCTGTTCCT GGGTACCTAT
ATCCAGGACG TGGGCGCCAT GACCCCGGTG TTCTTCACCT TCACCGACCG CCAGCGCGCC
TACACCGTGA TCGAAGCGAT CACCGGTTTC CGCCTGCACC CGGCCTGGTA CCGCATCGGT
GGCGTCGCCC ACGACCTGCC ACGCGGCTGG GACAAGCTGG TCAAGGACTT CGTCGAATGG
CTGCCCAAGC GCCTCGACGA ATACACCAAG GCTGCCCTGC AGAACAGCAT CCTCAAGGGC
CGTACCATTG GCGTTGCCGC GTACAACACC AAAGAAGCGC TGGAATGGGG CACCACCGGT
GCCGGCCTGC GCTCCACCGG TTGCGACTTC GACCTGCGTA AAGCCCGCCC GTACTCCGGC
TACGAGAACT TCGAGTTCGA AGTACCGCTG GCCCACAACG GCGATGCCTA CGATCGCTGC
ATGGTCCGTG TCGAGGAGAT GCGCCAGAGT ATCCGCATCA TCGACCAGTG CCTGCGCAAC
ATGCCGGAAG GCCCGTACAA GGCGGATCAC CCGCTGACCA CGCCGCCGCC GAAAGAGCGC
ACCCTGCAGC ACATCGAAAC CTTGATCACG CACTTCCTGC AAGTCTCGTG GGGCCCGGTC
ATGCCGGCCA ACGAGTCGTT CCAGATGATC GAGGCGACCA AGGGCATCAA CAGTTACTAC
CTGACGAGCG ATGGCGGCAC CATGAGCTAC CGCACCCGGA TCCGTACCCC GAGCTACCCG
CACCTGCAGC AGATCCCTTC GGTGATCAAA GGCAGCATGG TCGCCGACCT CATTGCGTAC
CTGGGCAGTA TCGACTTCGT TATGGCTGAC GTGGACCGCT AA
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| Protein sequence | MTADNAIFIP PYKADDQDVV VELNNRFGAE AFVAQETRTG MPVLWVKRAQ LKEVLSFLRG
VAKPYSMLYD LHGVDERLRT QRRGLPAADF SVFYHLLSVE RNSDVMIKVS LSEGDLNLPT
VTGIWPNANW YEREVWDMFG IDFAGHPHLS RIMMPPTWEG HPLRKDYPAR ATEFDPYSLT
LAKQQLEEES ARFNPEAWGM KRQGANEDYM FLNLGPNHPS AHGAFRIVLQ LDGEEIVDCV
PDIGYHHRGA EKMAERQSWH SFIPYTDRID YLGGVMNNLP YVLAVEKLAG IKVPQKVDVI
RIMLAEFFRI TSHLLFLGTY IQDVGAMTPV FFTFTDRQRA YTVIEAITGF RLHPAWYRIG
GVAHDLPRGW DKLVKDFVEW LPKRLDEYTK AALQNSILKG RTIGVAAYNT KEALEWGTTG
AGLRSTGCDF DLRKARPYSG YENFEFEVPL AHNGDAYDRC MVRVEEMRQS IRIIDQCLRN
MPEGPYKADH PLTTPPPKER TLQHIETLIT HFLQVSWGPV MPANESFQMI EATKGINSYY
LTSDGGTMSY RTRIRTPSYP HLQQIPSVIK GSMVADLIAY LGSIDFVMAD VDR
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