| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3680 |
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| Symbol | |
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| ID | 5871473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4093963 |
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| End bp | 4094859 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641548803 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001669907 |
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| Protein GI | 167034676 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.301341 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00043388 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCAAAC GCCTGATGCC TTCGACCACC GCCCTTCAGT GCTTCGAAGC GGCCGCCCGC
CACCTCAGTT TCACCCGTGC GGCCCAGGAA CTGCACCTGA CCCAGAGCGC TGTCAGCAAG
CAGGTGGCGC AGCTTGAGGA CATGCTTTCG CACTCGCTGT TTCAGCGCAT TCGACGGCGC
CTGCACCTGA CCCCGGCCGG CGCGCTGTAC CTCACCGAAG TGAACAAGAT CCTCACCCAG
ATCGACATCT CCAGCCGCTA CATCCTCAGC TACGGCGACG AAACCGAAGT GCTGCGCATC
GCCACCCAAC CCACCTTCGG CGCGCGCTGG CTGGTGCCCA AGCTCAAGGG TTTTGGCGAC
CGCTACCCAC GCATTCACCT GGATGTACGC AATGAGTTGG AACCGTTCGA CCTGGTACAG
GCCAAGGCCG ACATCGCCTT TTTCTTCGGT CAGGGCACCT GGCCTGGTGC AACCTGCATC
GAGCTGTTCA GCGAAGAAGT GGTGCCCGTC TGCAGCCCGC AACTGCTGGC CAATCACCGA
TTCGACAGCG CCCAGGCGCT GACCGAGCAC CGCCTGCTGC AGTGCGTGTC GCGGCCGGAA
GCCTGGCATG AGTGGTTTCT GGGGCTGGGG CTGCACAGCC AGAACAGCTA CCACGGGCCG
CGCTTCGACA CGTTCTACCT GTGCATCCGG GCGGCCATTG CCGGCTGCGG CATTGCCCTG
ATACCACGCT ACCTGGTGGC CGAAGAACTG AGCGAGGGCA AGCTGGTGGT GGCTTGGGAC
CACCCGGTGG CGAGCAATGG CCGGCACTTC ATTGCCCATG CCGAGCATGC GGCCGAAGTG
CCGAAGATCA GGGCTTTTGT GCAGTGGATT CGCGAACGGG TGGCTGAGGG GGACTGA
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| Protein sequence | MSKRLMPSTT ALQCFEAAAR HLSFTRAAQE LHLTQSAVSK QVAQLEDMLS HSLFQRIRRR
LHLTPAGALY LTEVNKILTQ IDISSRYILS YGDETEVLRI ATQPTFGARW LVPKLKGFGD
RYPRIHLDVR NELEPFDLVQ AKADIAFFFG QGTWPGATCI ELFSEEVVPV CSPQLLANHR
FDSAQALTEH RLLQCVSRPE AWHEWFLGLG LHSQNSYHGP RFDTFYLCIR AAIAGCGIAL
IPRYLVAEEL SEGKLVVAWD HPVASNGRHF IAHAEHAAEV PKIRAFVQWI RERVAEGD
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