Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3675 |
Symbol | |
ID | 5871468 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 4088844 |
End bp | 4089230 |
Gene Length | 387 bp |
Protein Length | 128 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641548798 |
Product | hypothetical protein |
Protein accession | YP_001669902 |
Protein GI | 167034671 |
COG category | [S] Function unknown |
COG ID | [COG3189] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.020732 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.000000942078 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATTCGCT GCAAGCGTGT CTACGATGCG GTCGCGGATG AAGATGGCCA GCGCGTGCTG GTCGACCGCC TGTGGCCGCG CAACAAACGC AAGGAAGACC TGCACGGGGA GTGGTTGCGC GAGGTGGCAC CCTCGGCAGA GTTGCGCAAG GCATTTCATC AGGGTGAGAT CGATTTTGCC GGTTTTACCC AGCGCTACCA GCAACAGCTG GCGGCCCACC CCGAGCACTG GTATCCGCTA CTGGACATGG CTGGCAAGGG TACGCTGACA TTGCTTTTTG CCGGCAAGGA CACCGAGCAC AACAATGCCC GAGTGCTGGC CGAGTGGCTG GAAGACGAAC TGGACCGGCG TGGGCCTGGT AGTTCGCCAG TCTGTTATGC CCGATGA
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Protein sequence | MIRCKRVYDA VADEDGQRVL VDRLWPRNKR KEDLHGEWLR EVAPSAELRK AFHQGEIDFA GFTQRYQQQL AAHPEHWYPL LDMAGKGTLT LLFAGKDTEH NNARVLAEWL EDELDRRGPG SSPVCYAR
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