| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3671 |
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| Symbol | uvrC |
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| ID | 5871464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 4085367 |
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| End bp | 4087124 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641548794 |
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| Product | excinuclease ABC subunit C |
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| Protein accession | YP_001669898 |
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| Protein GI | 167034667 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
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| TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.159711 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0000000375345 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTCGACG GCGAGGCCCG GCTGCTTTAC GTGGGCAAGG CCAAGAACCT GAAAAAGCGT
CTGGCCAGCT ATTTTCGCAA GACCGGCCTG GCGCCCAAGA CTGCCGCCTT GGTCGCGCGT
ATCGCCCAGG TCGAAACCAC CATCACCGCC AACGAAACCG AGGCGTTGCT GCTGGAGCAG
AACCTGATCA AGGAATGGCG GCCGCCCTAC AACATTCTGC TGCGCGACGA TAAATCCTAC
CCCTACGTGT TCCTGTCCGA CGGTGAGTTC CCACGATTGG GCATTCACCG TGGGGCGAAA
AAAGCCAAGG GCCGCTACTT CGGCCCTTAC CCCAGCGCCG GGGCGATCCG CGAAAGCCTC
AGCCTGCTGC AAAAGGCCTT TTCCGTGCGC CAGTGCGAAG ACAGCTACTA CGCCAACCGC
ACCCGGCCAT GCCTGCAGTA CCAGATAAAG CGCTGCAAAG GGCCTTGTAC CGACCTGGTG
AGCGCTGAGG AATACGCCGA GGACGTGCGC CATTCGGTGA TGTTCCTGGA GGGCCGTAGC
CAGCAACTGG GCAACGAATT GAATGCCGAA ATGGAAAAGG CCGCCATGGC CCTCAATTTC
GAAAAAGCCG CCGAACTTCG TGACCAGATC GCGCTGCTGC GCCGCGTGCA GGACCAGCAG
TACATCGAAG GCGGCAACGG CGATGTCGAC GTGATCGCGG CCTTCGTCAA CCCAGGTGGT
GCCTGTGTGC ACTTGATCAG CGTGCGTGGC GGACGAGTGC TGGGTAGCAA GAACTTCTTC
CCGCAGGTGG GCATCGAAGA GGAAGTGGCC GAGGTCATGG CCGCCTTCCT TTCCCAGTAC
TACCTGGGCA ACGCAGAGCG CGAATTGCCA GGCGAGTTGA TCGTCAACGT TGTTCACGAA
GACTTCGACG CCATTACCGA GGCACTGCAC ACACTGCGTG GCCGCGAGCT GACCATCAGC
CACCGGGTGC GTGGCACCCG CGCCCGCTGG CAGCAGCTGG CGGTGACCAA TGCCGAGCAG
GCGCTGAATG CCCGCCTGGC CAACCGTCAG CACATGGCGG CACGTTTCGA AGCCCTGGCT
GAAGTGCTGG GCCTGGACGA AGTGCCACAA CGCCTGGAAT GCTACGACAT CAGCCACTCC
AGTGGCGAAG CCACTGTGGC CAGTTGCGTG GTGTTCGGCC CCGAAGGCCC GCTGAAATCC
GATTACCGGC GCTTCAATAT CGAAGGCGTC ACGGCGGGTG ACGACTACGC CGCCATGCAC
CAGGCCCTGA CCCGTCGCTA CGGGCGTATC AAGGATGGCG AGGGCAAACT GCCTGACGTG
CTGCTGGTGG ACGGCGGCAA AGGCCAGCTG AACATGGCCC GCGACGTGAT GCAGGAGCTG
GGCTTTACCG ACCTGACCCT GCTCGGTGTG GCCAAGGGCG TAACGCGCAA GGCGGGTTTC
GAAACCCTGT ACCTGAACGA CGTGCACCAC GAATTCACCC TCAAAGGCGA TTCCTCGGCG
TTGCACCTGA TCCAGCAGAT CCGCGACGAA GCCCACCGTT TTGCTATCAC CGGGCACCGC
GCCCGCCGTG GCAAGGCCCG TCGCGTCTCC AGCCTTGAAG ATGTAGCCGG GGTGGGGCCG
AAGCGCCGCC GCGACCTGCT GAAACATTTC GGCGGCCTGC AAGAGCTCAA CCGCGCCAGT
ATCGATGAAA TAGCCAAAGC CCCCGGCATC AGTAAAAAGC TTGCCGAATC AATTTATGCC
AGCCTGCATA GCGAGTAG
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| Protein sequence | MFDGEARLLY VGKAKNLKKR LASYFRKTGL APKTAALVAR IAQVETTITA NETEALLLEQ
NLIKEWRPPY NILLRDDKSY PYVFLSDGEF PRLGIHRGAK KAKGRYFGPY PSAGAIRESL
SLLQKAFSVR QCEDSYYANR TRPCLQYQIK RCKGPCTDLV SAEEYAEDVR HSVMFLEGRS
QQLGNELNAE MEKAAMALNF EKAAELRDQI ALLRRVQDQQ YIEGGNGDVD VIAAFVNPGG
ACVHLISVRG GRVLGSKNFF PQVGIEEEVA EVMAAFLSQY YLGNAERELP GELIVNVVHE
DFDAITEALH TLRGRELTIS HRVRGTRARW QQLAVTNAEQ ALNARLANRQ HMAARFEALA
EVLGLDEVPQ RLECYDISHS SGEATVASCV VFGPEGPLKS DYRRFNIEGV TAGDDYAAMH
QALTRRYGRI KDGEGKLPDV LLVDGGKGQL NMARDVMQEL GFTDLTLLGV AKGVTRKAGF
ETLYLNDVHH EFTLKGDSSA LHLIQQIRDE AHRFAITGHR ARRGKARRVS SLEDVAGVGP
KRRRDLLKHF GGLQELNRAS IDEIAKAPGI SKKLAESIYA SLHSE
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