Gene PputGB1_3669 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3669 
Symbol 
ID5871461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp4083218 
End bp4084471 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content66% 
IMG OID641548791 
Productarsenical pump membrane protein 
Protein accessionYP_001669896 
Protein GI167034665 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1055] Na+/H+ antiporter NhaD and related arsenite permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000751712 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000221941 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCCTGTCA GCGAAAACGC ATCGATCATC TGGGTCGTAG CCGCCCTCGC CACTTGCGGC 
GTCATCCTGC GCCCCTGGCG TATTCCGGAG TACGCCTGGG CCATGGGCGG CGCACTGCTG
CTGACCGCTC TTGGCCTGAT CACGCCGCAC AGCGCGCTGG CTGCGGTGGC CGAAGGCAGC
GACGTCTACC TGTTCCTGAT CGGCATGATG GTGCTGGCCG AGCTTGCTCG CCAAGAAGGC
CTGTTCGACT GGCTGGCCCA CTATGCCGTC CAACACGCGC GAGGATCGGG GCAACGGCTG
TTCGACCTGG TGTTCCTGGT GGGCACGCTG GTCACTGTTT TTTTGTCCAA CGATGCCACG
GCCGTGGTGC TGACCCCGGC AGTCTACGCT GCGTGCAAGG CCGCCAAGGC CGAGCCTTTG
CCGTACCTGT TCATCTGCGC CTTCATCGCC AACGCCGCCA GCTTCGTGCT GCCCATCTCG
AACCCGGCCA ACCTCGTGGT ATTTGGCAGC CAGATGCCGC CGCTACTGGA CTGGTTAAGA
CAGTTCAGCC TGCCATCACT GGCGGCAATT GCCCTGACCT ACGTGGCCCT GCGCCTGTCT
CAGCGCCGAC AGATCCGCCA GCCGCTGGCC TTGAACGTTC AAACCCTGCC ACTGAGCGCG
GGCGCACGGT TGTGCGCAGT GGGTATCGCC TTCACCGCGG TCTTGCTGCT GGGCGCCTCG
GCGCTGGACC AGGCGCTGGG GCTGCCGACA TTCTGCGCGG GGGTAGCGAC CACCGCCCTG
ATCCACCTGC GCCAGCGGCG CAGCCCGACG CCAGTGTTGC GCCATGTCGC GTGGGGCGTG
CTGCCACTTG TAGCAGGCTT GTTCGTGCTG GTCGAAGCGG TCGCCCAAAC CGGCCTGGTG
GTGCGTCTTG CCCATGCGCT GGCGGCGCTC GCCGAGGGCT CGCCGAACAC AGCCAGTTGG
GTAGCGGGCA CAGGGGTTGC TATTGCCAGC AACCTGATGA ACAACCTGCC GACCGGGCTG
ATTGCCGGGG CCATGGGGTC GGTCGTCGAG TTGCCGCAGC AAACTACCGC GGCTTTGCTG
ATCGGCGTGG ACCTGGGCCC GAATCTGTCG ATTACCGGAT CGCTGGCCAC GCTGCTATGG
TTGGTCGCGA TCCGCCGTGA AGGAGAGCAC GTGGGGGCCT GGCACTTTTT ACGCCTGGGG
CTATTGGTGA TGCCCCCTGC CCTGGCTGCC GCGCTGCTGG CGTTGTGGGT GTAA
 
Protein sequence
MPVSENASII WVVAALATCG VILRPWRIPE YAWAMGGALL LTALGLITPH SALAAVAEGS 
DVYLFLIGMM VLAELARQEG LFDWLAHYAV QHARGSGQRL FDLVFLVGTL VTVFLSNDAT
AVVLTPAVYA ACKAAKAEPL PYLFICAFIA NAASFVLPIS NPANLVVFGS QMPPLLDWLR
QFSLPSLAAI ALTYVALRLS QRRQIRQPLA LNVQTLPLSA GARLCAVGIA FTAVLLLGAS
ALDQALGLPT FCAGVATTAL IHLRQRRSPT PVLRHVAWGV LPLVAGLFVL VEAVAQTGLV
VRLAHALAAL AEGSPNTASW VAGTGVAIAS NLMNNLPTGL IAGAMGSVVE LPQQTTAALL
IGVDLGPNLS ITGSLATLLW LVAIRREGEH VGAWHFLRLG LLVMPPALAA ALLALWV