| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3668 |
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| Symbol | |
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| ID | 5871460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4082541 |
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| End bp | 4083056 |
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| Gene Length | 516 bp |
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| Protein Length | 171 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641548790 |
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| Product | sigma-70 region 4 type 2 |
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| Protein accession | YP_001669895 |
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| Protein GI | 167034664 |
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| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00000000155217 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0000000000111348 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACCCGTC TGCTGCTGCC CCTTGAACAC CCTACCACTG CCGCCGAACA CAATGCCGAC
GATGCCCTTC TACATGCCCT GAAACGGCTG CCACGGCGCG TGCAGCAGGT GTTTCTGCTC
AACCGCCTGG ACCAGCTGGA CTTTGCCACG ATCGCTAGCC GCCTTGATCT GCCACTGGCA
AGCATTGAAC GGAACATGGA CCAAGCGCTG CAGGTGGGCC GCTCGCGCCG GGATGTACTG
GCGAGTGTTG CCGGGCAATG GTATGTGCGC TTGCAGAGCC CACAGGTGAC AGCGTGCGAG
CGGATCGACT TCCGCCGCTG GCTGGATGCG GACCCGGCTA ACTTGCAAGC GTTTCATGAC
ACAGAGCTAC GCTGGCGCAG CCTGCTGGCA CCAGCACGAC AACTGGGCCA CGACGGCTGG
TATCGGCAAG GCCGGGCTGC ACTGTCGCTG GGTGGTTGCT CGATTGCGGT GGGGCTTGGC
GTTACAGCCC TGGTACTGTT CGGCTTCTGG GCCTGA
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| Protein sequence | MTRLLLPLEH PTTAAEHNAD DALLHALKRL PRRVQQVFLL NRLDQLDFAT IASRLDLPLA
SIERNMDQAL QVGRSRRDVL ASVAGQWYVR LQSPQVTACE RIDFRRWLDA DPANLQAFHD
TELRWRSLLA PARQLGHDGW YRQGRAALSL GGCSIAVGLG VTALVLFGFW A
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