| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3666 |
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| Symbol | |
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| ID | 5871458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 4081010 |
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| End bp | 4081663 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641548788 |
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| Product | XRE family transcriptional regulator |
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| Protein accession | YP_001669893 |
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| Protein GI | 167034662 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00000000100264 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000000000010366 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGAAAACT GGAACGCATT TCTCAAGCGC TACAAGCGCG AACATAACCT CAGCCAGCTC
AAGCTGGCTG AACGCCTGGG CATGACTCAG GGCGGCGTGG GGCATTGGCT GCGCGGCACG
CGGCGGCCGA CGGTGGAAAC CATCAACGAA AAGCTCGAGA AACTCGGCCT GGTGTTTTTG
GAAGCACAAG TCATGGTGGT AGAGCGCAAC ATCGTGCGCG AAGCCCCTGG GCGTTATGCA
GTCGAGCAGC CGGTGTCGGG CGAAGCGCTG CTTTATGCAA GCTTTCGCTT CCCGGTGTTG
GCTTGGTCCG ACTTGCAGGG GCCTTTGCCT GAAACAGCCA AGTCCAACGA GCAGACCGAT
TACATGCCAG CAGGTAATGC GTTCTGGCTG TTGGTTGAAA ACGACTCGAT GAATGCAGCC
AGCGGCAAGA GTGTTCCTGA GGGCATGCGC GTATTGGTGG ATACTGGCCT GCCGGTAGAG
CCCGGCAGGC TGGTGATTGC GCGCCAGCCG GGGCGGCCTG CTGTGTTGCG GCAGTTGGTC
GAAGAGGGTG GCGACAAGAT GCTCAAGCCG CTGAATACGC GCTATCCGAC AATCCTGTGT
GAAGAGGGAT GCGAGTTTAT CGGTGTGGTC GTGCGGGTGC ATGGCGCCTT CTAG
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| Protein sequence | MENWNAFLKR YKREHNLSQL KLAERLGMTQ GGVGHWLRGT RRPTVETINE KLEKLGLVFL
EAQVMVVERN IVREAPGRYA VEQPVSGEAL LYASFRFPVL AWSDLQGPLP ETAKSNEQTD
YMPAGNAFWL LVENDSMNAA SGKSVPEGMR VLVDTGLPVE PGRLVIARQP GRPAVLRQLV
EEGGDKMLKP LNTRYPTILC EEGCEFIGVV VRVHGAF
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