| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3661 |
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| Symbol | |
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| ID | 5871453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 4073516 |
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| End bp | 4075198 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641548783 |
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| Product | AMP-binding domain protein |
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| Protein accession | YP_001669888 |
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| Protein GI | 167034657 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.000000288335 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTCAAC CGAGTTATAC CCGCGGTCGC CAGGACCAAG CCTTGCTGAC CCAGACCATC
GGCCAGGCCT TCGATGCCAC CGTGGCCCGC TGTGCCGACA GCGAGGCGCT GGTGTCGCGC
CATCAAGGCC TGCGCTACAG CTGGCGGCAG TTGGCCGCAC AGGTCGAAAA CCATGCACGC
GCGCTCATGG CCCTGGGCGT GAACACCGGC GAGCGTGTCG GTATCTGGTC GCCCAACTGC
GCGCAATGGT GCATTTTGCA ACTGGCCAGC GCCAAGGTTG GGGCCATCCT GGTCAACATC
AACCCTGCCT ATCGCGTGGG CGAGTTGGAA TACGTGTTGC GCCAGTCCAG CTGTCGCTGG
CTGGTGTGTG CCGATGCCTT CAAGACGTCT GATTACCATG CCATGGTTCA GGAACTGGTG
CCTGAATTGG CCAGCGCCAA GCCAGGTGAA CTGGCCAGTG AGCGCCTGCC AGCGTTGCGC
GGTGTGATCA GCCTGGCCGC CAACCCGCCT GCCGGCTTCC TGCCCTGGCA CGCATTGCCC
GAGTGGGCAG GGCAGACCTC GCCAGAGGCC TGCAGCGCTC GCCAGCAAAG CCTGCAGTTC
GACCAGCCGG TGAACATCCA GTACACCTCC GGCACCACCG GCGCGCCCAA GGGTGCCACC
CTCAGTCACT ACAACATCCT CAACAACGGT TTCATGGTCG GCGAAAGCCT GGGGCTGACC
GAGCGCGACC GTATGGTGAT CCCGGTGCCG CTGTACCACT GCTTCGGCAT GGTCATGGCC
AACCTCGGTT GCATCACACA CGGCAGCACC ATGATCTACC CCAACGACGC CTTCGACGCC
GAGCTTACCC TGCGCGCCGT GGCCGAGGAG CGCGCCAGCA TCCTCTATGG CGTGCCGACC
ATGTTCATCG CCATGCTCGA CCACCCGTCG CGTGCGCAGA TGGACCTGTC GACCCTGCGC
AGTGGCATCA TGGCCGGTGC CACCTGCCCG ATCGAGGTGA TGCGCCGGGT CATCGACCAG
ATGCACATGG CCGAAGTGCA GATTGCCTAC GGCATGACCG AAACCAGCCC GGTGTCGCTG
CAGACCGGCC CGGACGACGA CCTGGAACTG CGCGTGACCA CCGTCGGCCG CACCCAGCCG
CAGCTGGAAA ACAAGCTGGT GGACGCCGAC GGCTGCATCG TCCCGCGCGG TGAGATCGGT
GAACTGTGCA CCCGTGGCTA CAGCGTGATG CTCGGCTACT GGGACAACCC CCAGGCCACG
GCGGACGCCA TCGACCCGGC GGGCTGGATG CATTCGGGCG ACCTGGCGGT GATGGATGAA
CATGGGCACG TGCGCATCGT CGGGCGCAAC AAGGACATGA TCATTCGTGG CGGTGAGAAC
ATTTACCCGC GTGAGCTGGA AGAGTTCTTC TATACCCACC CGGCGGTGGC CGATGCGCAG
GTGATCGGCA TTCCGTGCAG CCGCTATGGT GAAGAAATCG TGGCCTGGAT CAAGCTGCAC
CCAGGGCATA GCGCCACGGT TGAGGAACTG CAGGGTTGGT GCAAGGCACG CATCGCCCAC
TTCAAGGTGC CTCGGCATAT TCGTTTTGTT GAGGAATACC CGATGACGGT GACCGGCAAG
GTGCAGAAGT TCCGCATGCG GGAGATTAGT GTGGCGGAAA TCTCGGCGGT ATCTGCGGGT
TGA
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| Protein sequence | MSQPSYTRGR QDQALLTQTI GQAFDATVAR CADSEALVSR HQGLRYSWRQ LAAQVENHAR
ALMALGVNTG ERVGIWSPNC AQWCILQLAS AKVGAILVNI NPAYRVGELE YVLRQSSCRW
LVCADAFKTS DYHAMVQELV PELASAKPGE LASERLPALR GVISLAANPP AGFLPWHALP
EWAGQTSPEA CSARQQSLQF DQPVNIQYTS GTTGAPKGAT LSHYNILNNG FMVGESLGLT
ERDRMVIPVP LYHCFGMVMA NLGCITHGST MIYPNDAFDA ELTLRAVAEE RASILYGVPT
MFIAMLDHPS RAQMDLSTLR SGIMAGATCP IEVMRRVIDQ MHMAEVQIAY GMTETSPVSL
QTGPDDDLEL RVTTVGRTQP QLENKLVDAD GCIVPRGEIG ELCTRGYSVM LGYWDNPQAT
ADAIDPAGWM HSGDLAVMDE HGHVRIVGRN KDMIIRGGEN IYPRELEEFF YTHPAVADAQ
VIGIPCSRYG EEIVAWIKLH PGHSATVEEL QGWCKARIAH FKVPRHIRFV EEYPMTVTGK
VQKFRMREIS VAEISAVSAG
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