| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3657 |
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| Symbol | |
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| ID | 5871449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 4065479 |
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| End bp | 4067689 |
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| Gene Length | 2211 bp |
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| Protein Length | 736 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641548779 |
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| Product | glycogen branching enzyme |
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| Protein accession | YP_001669884 |
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| Protein GI | 167034653 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0888692 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0129978 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGTTA CATTGCGTGA AAACGGTGGC CTTCGGCAAC GGGACCTCGA TGCCCTGGCC
CGCGCCGAAC ACGCCGATCC ATTTGCGGTA CTCGGCCCCC ATGGCGACGG CGCAGGCGGC
CAGGTGGTCC GCGCCTTCCT GCCCAGTGCC CTGAATGTGC GCATCCTGGC TCGCCACGAT
GGGCGCGTGC TTGCCGAAAT GGTGCAGGGC AGCTTGCCCG GGTTGTTCAG CGCGCACCTT
GATGAGGCAC AACCCTACCA GTTGCAGATC GGTTGGGCCG GTGGCGATCA GATTACCGAA
GACCCCTACA GCTTTGGCCC ACAATTGGGT GACATGGACC TTCACCTGTT CGCCGAAGGC
AATCATCGAG ACTTGTCCGG GCGCTTTGGC GCCCAGCCTA CCCAGGTCGA TGGTATCGAC
GGCGTGTGCT TCTCGGTGTG GGCGCCGAAC GCTCGGCGGG TGTCGGTGGT GGGTGACTTC
AACAACTGGG ATGGGCGTCG CCACCCCATG CGCCTGCGCC ACAGCGCCGG GGTGTGGGAG
CTGTTCATTC CGCGCTTGGG TGTGGGTGAA ACCTACAAGT TCGAAGTGCT CGGCAAGGAC
GGCATACTGC CGCTGAAAGC CGACCCGCTG GCCCGTGCCA CGGAACTGCC GCCGAGCACT
GCGTCCAAGG TGGCCGGTGA GCTTGGCCAC GCTTGGCAAG ACCACGACTG GATGGCGCAA
CGCGCGCAGC GCCATGCCTA CAACGCGCCA CTGTCGATCT ACGAACTGCA CCCAGGGTCA
TGGCGCTGCG AGCTGGACGA GGCGGGTGAA GTCGGGCGCT ATTACAACTG GCGCGAACTG
GCCGAGCGGC TGGTGCCCTA TGTGCAGGAA CTGGGCTTTA CCCACATCGA GCTGTTGCCG
ATCATGGAGC ACCCCTTCGG CGGTTCCTGG GGTTATCAGC CACTGTCGAT GTTCGCGCCC
ACCTCGCGCT ACGGCAGCCC GGAGGACTTC GCAGCCTTCA TCGATGCCTG CCACCAGGGT
GGCATTGGTG TGCTGCTGGA CTGGGTGCCG GCGCATTTCC CCACCGACGA ACACGGCCTG
GCGCGGTTCG ATGGCACTGC GCTGTACGAA TACGATAACC CCCTGGAGGG CTACCACCAG
GACTGGAACA CGCTCATCTA CAACCTCGGC CGTAACGAGG TGCGTGGTTT CATGATGGCT
TCTGCGTTGC ACTGGCTGAA GCACTTTCAC ATCGACGGCC TGCGCGTCGA TGCAGTGGCT
TCGATGTTGT ACCGCGACTA TTCGCGCAAG GCCGGTGAAT GGGTGCCCAA CCGCCATGGC
GGGCGCGAGA ACCTGGAAGC CATCGACTTC ATCCGCCACC TCAACGGCGT GGCTGCCCAC
GAGGCCCCTG GGGCACTGAT CATCGCCGAG GAGTCCACCG CCTGGCCCGG CGTCAGCCAG
CCGACCCAGC AGGGCGGCCT GGGCTTTGCC TACAAGTGGA ACATGGGTTG GATGCACGAC
ACCCTGCATT ACATCCAGAA CGACCCGGTG CACCGCACTT TCCACCACAA CGAGATGAGC
TTCGGGCTGA TCTATGCCTA TTCCGAGCAT TTCATCCTGC CCATCTCCCA TGACGAAGTG
GTGCACGGCA AGCACTCGCT GATCGACAAG ATGCCCGGCG ACCGCTGGCA GAAGTTCGCC
AACTTGCGCG CCTACCTCAC CTTCATGTGG GCGCACCCGG GCAAGAAGCT GCTGTTCATG
GGGTGCGAGT TCGGCCAGTG GCGTGAGTGG AACCACGACA GCGAACTGGA CTGGTACCTG
CTGCAGTACC CCGAGCACCA GGGCGTGCAG CGCCTGGTGG GCGACCTCAA CCGCCTGTAC
CGCGACGTGC CGGCGCTGCA CGAGCAGGAC TGCCAGCCGC AGGGCTTCCA GTGGCTGATC
GGTGACGACG CGCAAAACAG CGTCTACGCC TGGCTGCGCT GGAGCAGCAG CGGTGAGCCG
GTGCTGGTGG TGGCCAACTT CACCCCGGTG CCGCGCGAGG GCTACCGTAT TGGCGTGCCG
TTTGGCGAGC GTTGGCAAGA GCTGCTGAAC AGCGATGCCG GGCTGTATGC CGGGTCCAAC
GTGGGCAACC TGGGGGCAGT GGCCAGTGAG GCATTGCCCA GCCATGGGCA GCCATTGTCG
CTGGCGCTGA ACCTGCCGCC GCTTGGGGTT CTGATACTGA AACCGGCCTG A
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| Protein sequence | MNVTLRENGG LRQRDLDALA RAEHADPFAV LGPHGDGAGG QVVRAFLPSA LNVRILARHD
GRVLAEMVQG SLPGLFSAHL DEAQPYQLQI GWAGGDQITE DPYSFGPQLG DMDLHLFAEG
NHRDLSGRFG AQPTQVDGID GVCFSVWAPN ARRVSVVGDF NNWDGRRHPM RLRHSAGVWE
LFIPRLGVGE TYKFEVLGKD GILPLKADPL ARATELPPST ASKVAGELGH AWQDHDWMAQ
RAQRHAYNAP LSIYELHPGS WRCELDEAGE VGRYYNWREL AERLVPYVQE LGFTHIELLP
IMEHPFGGSW GYQPLSMFAP TSRYGSPEDF AAFIDACHQG GIGVLLDWVP AHFPTDEHGL
ARFDGTALYE YDNPLEGYHQ DWNTLIYNLG RNEVRGFMMA SALHWLKHFH IDGLRVDAVA
SMLYRDYSRK AGEWVPNRHG GRENLEAIDF IRHLNGVAAH EAPGALIIAE ESTAWPGVSQ
PTQQGGLGFA YKWNMGWMHD TLHYIQNDPV HRTFHHNEMS FGLIYAYSEH FILPISHDEV
VHGKHSLIDK MPGDRWQKFA NLRAYLTFMW AHPGKKLLFM GCEFGQWREW NHDSELDWYL
LQYPEHQGVQ RLVGDLNRLY RDVPALHEQD CQPQGFQWLI GDDAQNSVYA WLRWSSSGEP
VLVVANFTPV PREGYRIGVP FGERWQELLN SDAGLYAGSN VGNLGAVASE ALPSHGQPLS
LALNLPPLGV LILKPA
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