| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3656 |
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| Symbol | |
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| ID | 5871448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4064279 |
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| End bp | 4065355 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641548778 |
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| Product | outer membrane autotransporter |
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| Protein accession | YP_001669883 |
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| Protein GI | 167034652 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3468] Type V secretory pathway, adhesin AidA |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0145714 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGCA CCTCGAACCC CTTGCGCTTC GACAGCATTT TCTACGCGGT TTCCACGTCG
CTGCTTCTGG CAACCCCGGT GGAAACTTTC GCGTACGAAC TGCAGGATGA CCCTATTTCG
CCCGGCTTTC TGCAGCAGAC AGCAGTGCCT CAGCTGTCGC TCGACCCGAT CAGCGCCAGT
GGCTTGAGCA TCGGCACCCT GAACGCGTTC TCCCAAGCCA TGACTGCACG TCACGGGCAG
GCGGCACCGG ACCTGGTCGC CAGCCAGTGG GCGCAGTTCT TCCCAACCAC CTCGCGCAGT
GTTTCACAGC CCCCAGACCA ACTGGAGGCA CCCAGCCAGC AACTGACAAT CGGCCCGGAC
CTGTTCGTGC GTGAAACTGC AGCGGGCAAT GTGCACCGCG CAGGGATTTT CGTGGGGCAC
AACAACCTGC AAAGCAGCTT CAACGGCATG CGCCCGCTGT TGGGCGACAA GCAGCGCAAT
GCCGTGAACC TGAGTGGGGA AAGCCTGGGC GTTTACTGGA GCATGACCCA TGAACAGGGT
TGGCACCTGG ACGCCGTGGC CATGGGCTCG CGCATCGATG TGCTGGGCCG TGGCGAAAGC
GGCCAACGAC TGGACGACAG CGGCCACGCG ATGACCTTCT CGGTGGAGGG CGGTTACCCG
ATCCGCCTGG GCGGCAACTG GGTGATCGAA CCTCAGGCAC AGTTGATAAA TCAACAGTTC
TTCCCTGGCA ACCAGGTGCA GGAAGAGACC TTGCAGGCAT TTGACAGCCA GCCAACCTGG
AGCGGCCGTG TGGGTGCCAA ATTGTCCGGT CGCTACGAAG TGCGTGGCAT GCCCATCGAG
CCCTATGTAC GGACCAACGT GTGGTATGAC TTCAGCAATG CCGATGAAGT GAAGCTGGAC
CAGGTCGACA AAATCTCCAG CTCGCGCTAT TCGACCACGG TGGAACTGGG CTTGGGGCTG
GTGGCACGGG TAACACCTTC AGTGGCCTTG TTCGTGAGTG CCGACTACAG CAGCGATGTG
GATGACAATG ACCTGAACGG GTTGATTGGC AGCCTTGGGG TGCGGATGCG GTGGTAG
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| Protein sequence | MKSTSNPLRF DSIFYAVSTS LLLATPVETF AYELQDDPIS PGFLQQTAVP QLSLDPISAS
GLSIGTLNAF SQAMTARHGQ AAPDLVASQW AQFFPTTSRS VSQPPDQLEA PSQQLTIGPD
LFVRETAAGN VHRAGIFVGH NNLQSSFNGM RPLLGDKQRN AVNLSGESLG VYWSMTHEQG
WHLDAVAMGS RIDVLGRGES GQRLDDSGHA MTFSVEGGYP IRLGGNWVIE PQAQLINQQF
FPGNQVQEET LQAFDSQPTW SGRVGAKLSG RYEVRGMPIE PYVRTNVWYD FSNADEVKLD
QVDKISSSRY STTVELGLGL VARVTPSVAL FVSADYSSDV DDNDLNGLIG SLGVRMRW
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