Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3655 |
Symbol | |
ID | 5871447 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 4063166 |
End bp | 4063960 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641548777 |
Product | endonuclease/exonuclease/phosphatase |
Protein accession | YP_001669882 |
Protein GI | 167034651 |
COG category | [R] General function prediction only |
COG ID | [COG3568] Metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0227458 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGACCCCG AAGCCGGCAG TGAAGGTTTC GCCAGCATCA ACCAGGCCCC GGCCGTAAAA CGCCTGCGGG TGCTGACGGT GAATACCCAC AAGGGCTTCA CCGCCTTCAA CCGGCGCTTC ATCCTGCCGG AACTGCGCGA GGCGGTGCGC AGCACCCAGG CCGATATCGT CTTCCTCCAG GAAGTGCTCG GTAGCCACGA CCGCCACGCC GCCCGTTACC CCGGCTGGCC ACAGACTTCG CAGTACGAAT TCCTGGCGGA CAGCATGTGG AGCGACTTCG CCTATGGCCG CAACGCGGTT TACCCCGACG GCCATCACGG CAATGCACTG CTGTCCAAAT ACCCGATCAT CGAGCACCGC AACCTTGATG TGTCGATCAC CGGGCCAGAG CGCCGTGGCC TGTTGCACTG CGTGCTGGAT GTACCGGGGC AAGGCCAGGT ACACGCGATC TGCGTGCACC TGTCGTTGCT GGAAAGCCAC CGGCAAAAAC AGCTGCAACT GCTGCGCAAA TTGCTGGACG CCTTACCCGC CGATGCCCCG GTGATCATCG CCGGCGACTT CAACGACTGG AAAACCCACG GCAACCGCAC GCTCGGCCTG CAACGCGACT TGCACGAGGC ATTCGAGCGC CACCATGGGC ACCTCGCCCG CACCTACCCT GCCCGCCTGC CGCTGCTGCG CCTGGACCGC ATCTACCTGC GTAACGCCGA AAGCCATGGG CCGCGGATTT TGGGGCACAA ACCTTGGTCG CACCTGTCAG ATCACCTGCC GTTGGCGGTT GAAGTGCGCC TCTAG
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Protein sequence | MDPEAGSEGF ASINQAPAVK RLRVLTVNTH KGFTAFNRRF ILPELREAVR STQADIVFLQ EVLGSHDRHA ARYPGWPQTS QYEFLADSMW SDFAYGRNAV YPDGHHGNAL LSKYPIIEHR NLDVSITGPE RRGLLHCVLD VPGQGQVHAI CVHLSLLESH RQKQLQLLRK LLDALPADAP VIIAGDFNDW KTHGNRTLGL QRDLHEAFER HHGHLARTYP ARLPLLRLDR IYLRNAESHG PRILGHKPWS HLSDHLPLAV EVRL
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