Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3652 |
Symbol | |
ID | 5871444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 4057733 |
End bp | 4060507 |
Gene Length | 2775 bp |
Protein Length | 924 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641548774 |
Product | maltooligosyl trehalose synthase |
Protein accession | YP_001669879 |
Protein GI | 167034648 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3280] Maltooligosyl trehalose synthase |
TIGRFAM ID | [TIGR02401] malto-oligosyltrehalose synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0116704 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.178483 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCCAC TGACCGCGAC CCTGCGCCTG CAATTTCACA GTGACTTCAC CCTTGATCAC GCCGTGCCGC TGGTACCGTA CTTCGCTCAA TTGGGCATAA GCCACCTGTA TGCCTCGCCT ATCCTCAAGG CCCGCGCGGG CTCGCGCCAT GGCTACGACG TGGTCGACCC TACCTGCGTG AACCCGGAGC TTGGCGGCGA GGCGGCACTG CAGCGACTGG TCGCCGCCCT GCGCCAGCAT GGCATGGGGC TGATCCTTGA CACTGTGTCC AACCATATGG CCGTGGGCGG TGCCGACAAC CCTTGGTGGC AAAGCCTGTT GGCCTGGGGC CGGCGCAGCC CGTATGCGGA GTTCTTCGAC ATCCAGTGGC ACTCCAGCGA CCCGCTGCTG GCCGGGCAAC TGCTGTTGCC GTTTCTCGGC AGCGACTATG GCGTGGCGCT GAAGAACGGC GACATACCGC TTGAATTCGA CAAGCAGCAA GGCACGCTGC AAATCGCCCA TTACGATCAC CGCTTCCCAA TCTGCCCGGT CGACTATGGC TGGATTCTCG CCCTCAGCCC AGAGCCGGCA CTCAAGGCCC TGGCCGAGCA CTTCACGGCA TTGGCCGAAT CGACCACCCC ACTGGCCGAT GCCCTTGCGC TGCACACCGA ACTGGCACGC TTGGTGCGCG AAGGTGCCGA CTTGGAATCA GCGCTAGTGG CATTCGACAG CCGCGCCGAA AATGGTTTCA AGCGCCTGCA CCTGCTGCTG GAGCGCCAGA CCTACCGCCT GGCCAGCTGG CGCACCGCCG CCGACGACAT CAACTGGCGG CGCTTCTTCG ACATCAACGA GCTCGGAGGT CTGAGGGTGG AGCGCGCAGT GGTGTTCGAG GCCACCCACG CCAAGCTGTT CGAACTGATC GAACGCGGCC TGGTGGACGG CCTGCGCATC GACCATATCG ACGGCCTTGC CGACCCGCGC GGCTATTGCC GCAAACTACG CCGACGGGTC GATGGCCTGC TGGCACAGCG GCCGCTGAGT GCAGCACTGG AGCACTTCCC GATCTACGTG GAGAAGATTC TTGGCGCTGA CGAGCACCTG CACCGCGACT GGCTCACCGA CGGCACCACC GGCTACGAGT TCATGAACCA GGTGTCGCTG CTGCAACACG ACCCGGCCGG CGAAGCGCCG CTGAGCGAGC TGTGGGCCAA CCTCAGCGAG CGCCCGGACT TCCCCGAAGA AGTGCGCCAG GCCCGTCACC TGGTACTCAA CGCCAGCCTG GCCGGTGACT GCGAATCGGT GGCCCTGGCC CTGCTGCAAG TGGCACGCAA CGACCTGATG ACCCGCGACC TGACCCTGGG CGCGATTCGC CGGGCCTTGC AGGCGCTGGT GGCGCATTAC CCTGTCTACC GTACCTACTT CAACGCCTGC GGGCGCCCGG CTGAAGACGA AAGGTTTTTC CAGCAGGCGC TGGTCAACGC CCGGCAAGAC CTTGGCGAAG CCGACTGGCC ACTGCTGGAA CAACTTGAAC GATGGCTGGG CGGGCAAGCC TGGCGTCACC TGCCACCGGG CCGCGCCCGC AAGCAGCTGC GCCATGCCTG CGTGCGTTTC CAGCAACTGA CCGCGCCCAG CGCCGCCAAA GCCGTGGAAG ACACCGCCTT CTACCGCAAC GCGCGGCTGC TGTCGCGCAA TGACGTGGGC TTCGAGGCCG AGCATTTCAG CGCAGCACCT GCGCACTTCC ACAACGAAGC CCAGCGGCGC CTGCGCGACT TCCCCGACAA CCTGCTGGCC ACCGCCACCC ACGACCACAA GCGCGGTGAA GACACCCGAG CGCGCTTGGC CGTACTCAGC GAGCGCGGGC CGTGGCTGGC CAGTCGGGTG GAGCATTGGC GTGAATTGGC TGCCCCCTTG CGCACACTGC TGGACGACGG CCCAGCACCC AGCCCTGGCG ACGAGCTGAT GCTCTTGCAG ACCTTGCTCG GCAGCTGGCC GCTAACGCTC GACCTGCAGG ACACGGGCGG CCTGCGCACA TACGCCGAGC GCATTCGCCA ATGGCAGCAG AAGGCCCTGC GCGAAGCCAA GTTGCGCAGC AGCTGGAATG CACCGAACGA AGCCTATGAA AGCGCCTGCA CCCGCTATGT CGATGGCCTG CTGCTGGACA GCGAGAACCA GCAACTGCGC AAGTCCGTGG CCGATGCCGC ACAACTGCTG GCCTGCCCAG GCGCCCTCAA CGGCCTGGTC CAAACCCTGC TGCGCATGAC AACCCCAGGC GTGCCCGACC TGTACCAGGG CAATGAATAC TGGGACTTCA GCCTGGTCGA CCCGGATAAC CGCCGCGCCG TGGACTACGC TTGCAGGCGT CGTACCCTCG ACGACGCCAC AGCGCCCGCC GAGTTGCTGA CGCACTGGCG CGATGGCCGC ATCAAGCAGG CCTTGATCGC CAAAGTGCTG GACTGCCGCC AGGCACACGC CGACTTGTTC CGCCGTGGTG CCTACCTGCC ACTGAGCGTG CAGGGCCGGC ACGCAGACAA CGTGATTGCG TTTGCCCGCC TGGGAGAGGG CGAGCGGGCC GTCATCGTCG CGCCACGCCT GGCCAGTAGC CTGCTCGGTG GCGCCACAAC CCCGTTGATC CCGGCACAGA ACTGGGACGA CACCCGGCTG GTATTGCCGT TTGCCTTGTC AACTGCCAAC TCGACGGGAC TTTTCCCCTG TGCGGCGGTC AGCTCTTCCA AGGAGCTGAT GTTGAGCGCC GTGCTGGCGG AGTTTCCGGT CAACCTGTTG ATACAACAAT CTTGA
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Protein sequence | MKPLTATLRL QFHSDFTLDH AVPLVPYFAQ LGISHLYASP ILKARAGSRH GYDVVDPTCV NPELGGEAAL QRLVAALRQH GMGLILDTVS NHMAVGGADN PWWQSLLAWG RRSPYAEFFD IQWHSSDPLL AGQLLLPFLG SDYGVALKNG DIPLEFDKQQ GTLQIAHYDH RFPICPVDYG WILALSPEPA LKALAEHFTA LAESTTPLAD ALALHTELAR LVREGADLES ALVAFDSRAE NGFKRLHLLL ERQTYRLASW RTAADDINWR RFFDINELGG LRVERAVVFE ATHAKLFELI ERGLVDGLRI DHIDGLADPR GYCRKLRRRV DGLLAQRPLS AALEHFPIYV EKILGADEHL HRDWLTDGTT GYEFMNQVSL LQHDPAGEAP LSELWANLSE RPDFPEEVRQ ARHLVLNASL AGDCESVALA LLQVARNDLM TRDLTLGAIR RALQALVAHY PVYRTYFNAC GRPAEDERFF QQALVNARQD LGEADWPLLE QLERWLGGQA WRHLPPGRAR KQLRHACVRF QQLTAPSAAK AVEDTAFYRN ARLLSRNDVG FEAEHFSAAP AHFHNEAQRR LRDFPDNLLA TATHDHKRGE DTRARLAVLS ERGPWLASRV EHWRELAAPL RTLLDDGPAP SPGDELMLLQ TLLGSWPLTL DLQDTGGLRT YAERIRQWQQ KALREAKLRS SWNAPNEAYE SACTRYVDGL LLDSENQQLR KSVADAAQLL ACPGALNGLV QTLLRMTTPG VPDLYQGNEY WDFSLVDPDN RRAVDYACRR RTLDDATAPA ELLTHWRDGR IKQALIAKVL DCRQAHADLF RRGAYLPLSV QGRHADNVIA FARLGEGERA VIVAPRLASS LLGGATTPLI PAQNWDDTRL VLPFALSTAN STGLFPCAAV SSSKELMLSA VLAEFPVNLL IQQS
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