| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3650 |
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| Symbol | |
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| ID | 5871442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4053928 |
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| End bp | 4055670 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641548772 |
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| Product | malto-oligosyltrehalose trehalohydrolase |
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| Protein accession | YP_001669877 |
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| Protein GI | 167034646 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR02402] malto-oligosyltrehalose trehalohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.736771 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.277493 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACAGGC ATGGCGCACA CTTGTTGGAC GCCACGTCGG CGCGCTTCGC CCTCTGGGCA
CCCGATGCGC GCAGCGTGAG CGTTGAACTG GAACAGCAAC CGACCATCGA GCTGCTGCCC
GGCGACGATG GCTGGTACAC CGGCGTGGCC CCATGCCAGG CCGGTGACCG TTACCACTAC
CGAATCGACG GTGAATTGCT GGTGGCCGAC CCGGCCTCAC GCTACCAGCC CGACGGCGTA
CAAGGGCCGA GCCAGGTGGT GAATGTGGCC GGTTACGCCT GGCAACACCC GTGGCAAGGC
CGGCCTTGGC ATGAAGCGGT GATCCAGGAG GTGCATGTTG GCCTGCTCGA TGGCTACGCC
GGGGTAGCTC GGCAACTGCC GCGCCTGGCC GAACTCGGCA TCAGCGCGAT CGAACTGATG
CCGCTGGGGC AGTTCCCCGG CGAACGCAAC TGGGGCTACG ACGGGGTGCT GCCCTACGCG
CCGCAGAACA CCTACGGCAG CCCCGAACAG CTGTGCGCAC TGGTCGACCA GGCCCACGGC
GAAGGGCTGA TGGTATTGGT GGACGTGGTG TACAACCACT TCGGCCCCGA CGGCAATTAC
CTGCACCAGT ACGCCAGCCC GTTCTTCCGC GAAGACCGGC AGACGCCATG GGGCGCGGCC
ATCGACTTCC GCCGCCCGCA GGTGCGCGAG TACTTCATCC AGAATGCCCT GATGTGGCTG
TGCGACTACC GCTGCGACGG CCTGCGCCTG GACGCCGTGC ACGCCATCGA CCAGCCGGAC
TTCCTCGTCG AACTGGCGCA GCGCGTACGC GCTGCAGTGG AACCTGGCCG CCAGGTGTGG
CTGGTGCTGG AAAACGAGCA CAACCAAGCC GGCCTGCTGG AACAAGGCTT CGACGCCCAA
TGGAACGACG ACGGCCACAA TGCCCTGCAC GTGCTGCTGA CCGGCGAAAC CGAGGGTTAC
TACGCCGACT ACCAGCAACG CCCCATCGAC CAGTTGGCGC GCTGCCTTGG CGAAGGGTTC
GTGTTCCAGG GCGAACCCAA CCGGCATGGC ACGCCACGCG GCGAACCCAG CGCGCATCTG
CCGCCCAGTG CCTTTGTGTT GTTCCTGCAA AACCACGACC AGATCGGCAA CCGCGCGCTC
GGTGAACGCC TGACCCGCCT GTGCTCGCCA CCGGCCCTGC GGGCGGCCAC CGGCCTGCTG
TTGCTGGCAC CGATGATTCC GCTGCTGTTC ATGGGCGATG ACGACGGCAG CTGCCGGCCA
TTTCTGTTTT TCACCGATTT CCATGATGCG CTGGCCGATG CCGTGCGCGA AGGCCGCCGA
GGTGAATTCG CCCACTTCAC CGCGTTTGCC GACCCCGATC AGCGTGAGCA TATTCCCGAC
CCCAACGCCG AGCAGACTTT CGAGTCTTCG CGCCCGCAAA ACAAGGAGGT GATCGCCGGC
TGGCACGGCC TGTACCAGCA GCTACTCGAC CTGCGCCGCC GCCACGTCAT CCCGCACTTG
CCCGGCAGCC GTGCGCTGGG CGCCGAGGTG CACGGCGACA AGGCGCTGAC CGCACGCTGG
CGGCTAGGCA ATGGCAACAC ATTGCGCATC GACCTGAACC TGGCCGACAC CGCGCAAGCC
GTCGAGCTGC CCGCGCCACC CGCTCGGCTG TTCGACAGCA GCGACACCCG GCACCCGGAT
ACCCACCTGG CTGCGTACAG CTGTGTGGTC AGCCTGCTTC CCCCTGCCCA GGAGCGCCTA
TGA
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| Protein sequence | MHRHGAHLLD ATSARFALWA PDARSVSVEL EQQPTIELLP GDDGWYTGVA PCQAGDRYHY
RIDGELLVAD PASRYQPDGV QGPSQVVNVA GYAWQHPWQG RPWHEAVIQE VHVGLLDGYA
GVARQLPRLA ELGISAIELM PLGQFPGERN WGYDGVLPYA PQNTYGSPEQ LCALVDQAHG
EGLMVLVDVV YNHFGPDGNY LHQYASPFFR EDRQTPWGAA IDFRRPQVRE YFIQNALMWL
CDYRCDGLRL DAVHAIDQPD FLVELAQRVR AAVEPGRQVW LVLENEHNQA GLLEQGFDAQ
WNDDGHNALH VLLTGETEGY YADYQQRPID QLARCLGEGF VFQGEPNRHG TPRGEPSAHL
PPSAFVLFLQ NHDQIGNRAL GERLTRLCSP PALRAATGLL LLAPMIPLLF MGDDDGSCRP
FLFFTDFHDA LADAVREGRR GEFAHFTAFA DPDQREHIPD PNAEQTFESS RPQNKEVIAG
WHGLYQQLLD LRRRHVIPHL PGSRALGAEV HGDKALTARW RLGNGNTLRI DLNLADTAQA
VELPAPPARL FDSSDTRHPD THLAAYSCVV SLLPPAQERL
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