| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3645 |
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| Symbol | |
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| ID | 5871437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 4047020 |
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| End bp | 4048816 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641548767 |
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| Product | glycoside hydrolase 15-related |
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| Protein accession | YP_001669872 |
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| Protein GI | 167034641 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.150365 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCCC ACATCGAAGA CTACGCCCTG CTGGGCAACT GCCGCAGCGC CGCCCTGGTC
AGCCGCGATG GCTCGCTCGA CTGGCTGTGC CTGCCGCGCT TCGACGCTCC AGCGGTATTC
GCTGCCCTGT TGGGCAACGA AGAAAATGGC CGCTGGCGCC TATCTCCTTG CGACCCGATC
GAACACAGCA GCCGCCAATA CCTGGACGAT ACCTTGGTAC TGGAAACCAC CTGGGTGACG
GCCACTGGCC GGGCCCGCGT GCTCGATTTC ATGCCCCTGG GTGAGGTCAA TTCGGTGGTG
CGCATCGTCG AAGGCCTGTC TGGCGAAACC AACTTCGAAA TGGACCTGGT CATGCGCTTC
GACTACGGTC GCAGCGTGCC TTGGGTCGAG CGGCTCGACC CACTGACCCT CAGCGCCGTG
GCAGGCCCGG ACCGGCTGAT CCTGTGCAGC ACCGTGCCCC CGCATGCCCG CGACCACCAT
ACGGTTGCCC GCTTTCGCGT CGGCCCGGGC CAGCGCCACG TCTTCAGTCT GCGCCACCAA
CCCTCGCACT TGTCGGTACA GCCCAACTGC GATGTCGAAC AGGCCTTGGC CCAAACTGTC
GACCAATGGC AGGCTTTCGC CGCCCGTTGC CCAGAGGTAG GCCCATACAC TGCGCTGGTG
CGCCGCTCGC TGCTCACCCT CAAGGCCATG ACCTACGCCC CCACCGGCGG CATCGTCGCC
GCCGTCACCA CTTCGTTGCC CGAGCGTGTG GGCGGGGAGC GCAACTGGGA CTACCGTTTC
TGCTGGCTGC GCGACGCCAC CATGACCCTG CTGGCCTTCA TGAACCTCGG CTACTTCGAC
GAGGCCCAGG CCTGGCGTGA GTGGCTGCTG CGCTCGGTAG CCGGCAACCC CGAGCAGATG
CAGATCATGT ACGGCCTGGC CGGTGAGCGC GACCTGCAGG AGTACACCTT GCCGTGGCTG
GCCGGTTACG AACATTCGCA ACCCGTGCGA GTCGGCAATG CTGCCTCGCA GCAGATGCAA
TTGGACATCT ATGGCGAACT GGCCGATGCC ATGAGCCAGG CGATCAAAGG CGGCTTGCCG
CGTCACCCAC GCAGCGCCGC CATCTCCCGA TTGATTCTGC CCTACGTCGA GCGCATCTGG
CGTGAGCCGG ACGAAGGCAT CTGGGAGGTG CGTGGCGGCC GGCAGCAGTT TGTGCATTCC
AAGGTGATGG CCTGGGTCGC CTTCGACCGT GCTGCGGGGC TGGCCGACAC CACTGAAGAG
GGCCGCGAGC GCGGGCAGCA TTACCGCCAG GTGGCTGACG AGATTCACCG CGAAGTGTGC
GAGAACGGCC TGGACGCCAG CGGCAAATAC TTTGTCCAGG CTTATGGTTC AAGCGAAATG
GACGCCAGCC TGTTGCAGAT TGCCCTGACC GGCTTCCTGC CAGCAGATGA CCCACGCTTT
CTGCGCACGC TGGCACAGAT AGAACAGCGG CTATTGAAAA ACGGCCTGCT GCTGCGCTAC
GACAGCGACA GCTGCAGCGA CGGCTTGACC CCGGGTGAGG GCACCTTCCT GGTGTGTTCG
TTCTGGCTGG CCGATGTTTA CGTGTTGCTG GGGCGCCAGC AAGAAGCGCA GGCCTTGTAC
GAACGCCTGA CCGGCCTGTG CAACGACCTC GGCCTACTGG CCGAACAGTA CGACCCGGCG
GGCCAGCGCA TGCTCGGCAA CTTCCCCCAG GCGTTTAGCC ATATTGGCAT CATCAACACC
GCCCTGAACC TGCACCGCGC ACAGTGTCCG GTGCGAGACA GGGCACGTTG TGGATAG
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| Protein sequence | MPAHIEDYAL LGNCRSAALV SRDGSLDWLC LPRFDAPAVF AALLGNEENG RWRLSPCDPI
EHSSRQYLDD TLVLETTWVT ATGRARVLDF MPLGEVNSVV RIVEGLSGET NFEMDLVMRF
DYGRSVPWVE RLDPLTLSAV AGPDRLILCS TVPPHARDHH TVARFRVGPG QRHVFSLRHQ
PSHLSVQPNC DVEQALAQTV DQWQAFAARC PEVGPYTALV RRSLLTLKAM TYAPTGGIVA
AVTTSLPERV GGERNWDYRF CWLRDATMTL LAFMNLGYFD EAQAWREWLL RSVAGNPEQM
QIMYGLAGER DLQEYTLPWL AGYEHSQPVR VGNAASQQMQ LDIYGELADA MSQAIKGGLP
RHPRSAAISR LILPYVERIW REPDEGIWEV RGGRQQFVHS KVMAWVAFDR AAGLADTTEE
GRERGQHYRQ VADEIHREVC ENGLDASGKY FVQAYGSSEM DASLLQIALT GFLPADDPRF
LRTLAQIEQR LLKNGLLLRY DSDSCSDGLT PGEGTFLVCS FWLADVYVLL GRQQEAQALY
ERLTGLCNDL GLLAEQYDPA GQRMLGNFPQ AFSHIGIINT ALNLHRAQCP VRDRARCG
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