Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3644 |
Symbol | |
ID | 5871436 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 4046625 |
End bp | 4046951 |
Gene Length | 327 bp |
Protein Length | 108 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641548766 |
Product | plasmid maintenance system killer |
Protein accession | YP_001669871 |
Protein GI | 167034640 |
COG category | [R] General function prediction only |
COG ID | [COG3549] Plasmid maintenance system killer protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.018062 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGGTCAC ACTTGGTTCG TCTCCCAAAT GGATGCGGCG AGCTACCCAT GAACATCAGT TTTCGGCGCA AAGGACTGCG AGTTTTTCAT GAAATGGGTA ACACCCGAGG GATTCAGGCC CCTCACGCAA GGCGTTTAAA ACGGCAACTC CAGTTCCTTG ACCGCGCCAT GGCTGCGCAG GATTTGAACG TACCAGGCTG GCAGTTGCAT CCGCTCAAAG GAGCGTTATC GGATTTCTGG TCAGTCAGTG TTTCCGGTAA CTGGAGGCTG ACTTTTCGCT TCGTGGGTTC GGATGTCGAA CTGGTCGATT ACGTTGATTA CCACTGA
|
Protein sequence | MGSHLVRLPN GCGELPMNIS FRRKGLRVFH EMGNTRGIQA PHARRLKRQL QFLDRAMAAQ DLNVPGWQLH PLKGALSDFW SVSVSGNWRL TFRFVGSDVE LVDYVDYH
|
| |