| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3627 |
|---|
| Symbol | |
|---|
| ID | 5871419 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 4030234 |
|---|
| End bp | 4031013 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641548749 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001669854 |
|---|
| Protein GI | 167034623 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0730] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.849731 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCTTCG AACTCACCGT AGAACCCCTA ACTCTGCTGA TACTGGCTCT GGTCGCCTTC
GTCGCTGGTT TCATCGATGC TATCGCCGGT GGCGGCGGCC TGCTCACCAC CCCGGCCCTG
CTCACCGCCG GCATGCCGCC GCACCTGGTA CTGGGCACCA ACAAGCTCAG CTCCACCTTC
GGCTCGGCTA CCGCCGGTTT CACCTACTAC AAGCGCAAAC TCTTCCACCC GGCGCAGTGG
CGCCCTGCCT TGTTCGCCAC CTTGATCGGG GCACTGCTCG GCGCGGTCAT CGCCCACTAC
ATGCCCGCCG AATGGCTGAA CAAGATGCTG CCGGTCATCG TCTTCGCCTG TGGCATCTAC
CTGCTGTTCG GTGGCACGCC CAAGGCGCCG CTGGATGCCG ATGCCCCCAT CAAGAAGAAG
TGGCAAGTGC CGCAAGGCTT CACCCTGGGC TTCTACGACG GCGTGGCCGG CCCGGGTACC
GGGGCGTTCT GGACGGTCAG CACCCTGCTG CTGTACCCCA TCGACCTGGT CCGCGCCAGC
GGCGTGGCGC GCAGCATGAA CTTCGTCAGC AACATCGCGG CGCTGACGGT GTTCATCATT
TCCGGGCAGG TGGACTATAT CGTCGGCCTG TGCATGGGCC TGTCGGTGAT GGTCGGCGCC
TTCTTCGGCG CACGCACGGC GATCAGTGGC GGCAGCAAAT TCATCCGCCC TGTGTTCATC
ACCGTGGTAT TGGCGTTGAC CGTTCGCCTA GCGTGGCAGC ACTGGTTCGG GCAGGCCTAA
|
|---|
| Protein sequence | MPFELTVEPL TLLILALVAF VAGFIDAIAG GGGLLTTPAL LTAGMPPHLV LGTNKLSSTF
GSATAGFTYY KRKLFHPAQW RPALFATLIG ALLGAVIAHY MPAEWLNKML PVIVFACGIY
LLFGGTPKAP LDADAPIKKK WQVPQGFTLG FYDGVAGPGT GAFWTVSTLL LYPIDLVRAS
GVARSMNFVS NIAALTVFII SGQVDYIVGL CMGLSVMVGA FFGARTAISG GSKFIRPVFI
TVVLALTVRL AWQHWFGQA
|
|---|
| |