Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3626 |
Symbol | |
ID | 5871418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 4029263 |
End bp | 4030093 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641548748 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_001669853 |
Protein GI | 167034622 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.95991 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCTATG TGACCACGAA GGATGGCGTA CAGATTTTCT ACAAGGACTG GGGCCCGCGC GATGCCCCGG TCATCCACTT CCACCATGGC TGGCCGCTCA GTGCCGATGA CTGGGACGCG CAAATGCTGT TCTTCCTCGC CCAAGGTTAC CGCGTGGTCG CCCACGACCG GCGTGGCCAT GGCCGCTCCA GCCAGGTATG GGACGGGCAC GACATGGACC ACTACGCCGA CGATGTGGCC GCCGTGGTCG CCCACCTGGG CACTCAGGGC GCTGTGCATG TCGGCCACTC GACCGGGGGT GGCGAGGTGG TGCGTTACAT AGCCCGACAC CCGGAAGACA AGGTGGCCAA AGCCGTGCTG ATCGCTGCCG TACCGCCACT GATGGTGCAA ACGCCCGGCA ACCCAGGCGG CCTGCCCAAG GCGGTGTTCG ACGGTTTCCA GGCCCAGGTG GCCAGCAACC GGGCGCAATT CTACCGGGAT GTTCCAGCCG GGCCGTTCTA CGGCTACAAC CGCCCCGGTG TCGAAGCCAG CGAAGGTATC ATCGGCAACT GGTGGCGCCA GGGCATGATC GGTAGCGCCA AGGCCCATTA CGACGGCATC GTGGCATTTT CCCAGACCGA CTTCACGGAG GACCTGAAGG GTATCGAGCA GCCTGTGCTG GTGATGCATG GCGACGATGA CCAGATCGTG CCGTATGAAA ACGCCGGGGT GCTGTCGGCC AAGTTACTGC CCAATGGCAC GCTGAAAATC TACAAGGGCT ACCCGCATGG CATGCCGACT ACCCATGCCG ATGTGATCAA CGCGGATTTA CTGGCATATA TCCGTAGTTG A
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Protein sequence | MSYVTTKDGV QIFYKDWGPR DAPVIHFHHG WPLSADDWDA QMLFFLAQGY RVVAHDRRGH GRSSQVWDGH DMDHYADDVA AVVAHLGTQG AVHVGHSTGG GEVVRYIARH PEDKVAKAVL IAAVPPLMVQ TPGNPGGLPK AVFDGFQAQV ASNRAQFYRD VPAGPFYGYN RPGVEASEGI IGNWWRQGMI GSAKAHYDGI VAFSQTDFTE DLKGIEQPVL VMHGDDDQIV PYENAGVLSA KLLPNGTLKI YKGYPHGMPT THADVINADL LAYIRS
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