| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3620 |
|---|
| Symbol | |
|---|
| ID | 5871412 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 4021832 |
|---|
| End bp | 4022458 |
|---|
| Gene Length | 627 bp |
|---|
| Protein Length | 208 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641548742 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001669847 |
|---|
| Protein GI | 167034616 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2915] Uncharacterized protein involved in purine metabolism |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.714813 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAACC TGCAGGAGCA ATTGATTGCC CTGGGCGGCG TATTTCAGGC CGCTGTGCTG
GTCGACCGCA TTGCCCGCAC CGGCCAGGCC AGCGAGGCCA ATATCGGCTG CATGCTGGGC
AGCCTGCTGG TACGTGACCC CAAGGACACC CTGGAGGTGT TCGGCGGCGA CGACCTGAAC
CTGCGCGACG GCTACCGCGC GCTGGTCGGC GCCCTGGAGC GTGACCCCAG CAGCCTGCAG
CGCGAGCCAC TGCGCTACGC CCTGTCGATG CTGGGCCTGG AGCGCCAACT GAACAAACGT
GGCGACCTGC TTGACACCAT CGGCAATCGC CTGCCGCAAA TCCAGTCGCA GGCCGAGCAT
TTCGGCCTGG TTCACGAAAA CGTCATCGCT TCCAGCGGAG CCTTGTACCA GGACACGCTT
AGCACCTTGC GCCAGCGCAT CCAGGTGCAC GGCGACATGC GTTTCCTGCA GCAGGCCAGC
AACGCGTCGA AGATTCGCGC CCTGCTGCTG GCCGGCATCC GTGCCGCGCG CCTGTGGCGC
CAGCTGGGTG GACACCGCTG GCAGTTGGTG TTCAGCCGTC GCAAGTTGCT GAACGAACTG
TACGATATGA TGCGCACACC GTCCTGA
|
|---|
| Protein sequence | MSNLQEQLIA LGGVFQAAVL VDRIARTGQA SEANIGCMLG SLLVRDPKDT LEVFGGDDLN
LRDGYRALVG ALERDPSSLQ REPLRYALSM LGLERQLNKR GDLLDTIGNR LPQIQSQAEH
FGLVHENVIA SSGALYQDTL STLRQRIQVH GDMRFLQQAS NASKIRALLL AGIRAARLWR
QLGGHRWQLV FSRRKLLNEL YDMMRTPS
|
|---|
| |