Gene PputGB1_3618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3618 
Symbol 
ID5871410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp4020211 
End bp4020651 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content65% 
IMG OID641548740 
ProductNUDIX hydrolase 
Protein accessionYP_001669845 
Protein GI167034614 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.370258 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTGGC AACCCCACAT CACCGTCGCT ACCATCGTCG AACACGAAGG CAAGTTCCTT 
TTCGTCGAGG AGTTCAAAGC CAACCAGCAC GTCTTCAACC AACCCGCCGG CCACCTCGAA
CCCTTTGAGA CCCTGCCCCA GGCCGCCCTG CGCGAAACCC TGGAAGAAAC TGCCTGGGAA
GTCGAGCTCA CCGGCGTTGT CGGCATCTAC CTGTACACCG CCCCCAGCAA CGGCGTGACC
TACCAGCGCA TCTGCTTCGC CGCCCGCCCT GTGCGCCACC ACGAAGACCT CGCCCTGGAC
AGTGACATCG TCCGCGCCGT ATGGCTGACC CGCGACGAGC TGCTGGCCGA CCCCGCCCGC
TGGCGCAGCG AGCTGGTGCC GCGCTGCCTC GACGACTATT TGAACGGCCC GCTGCATAGC
CTTGAGCTGC TGCGCGACTG A
 
Protein sequence
MSWQPHITVA TIVEHEGKFL FVEEFKANQH VFNQPAGHLE PFETLPQAAL RETLEETAWE 
VELTGVVGIY LYTAPSNGVT YQRICFAARP VRHHEDLALD SDIVRAVWLT RDELLADPAR
WRSELVPRCL DDYLNGPLHS LELLRD