Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3618 |
Symbol | |
ID | 5871410 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 4020211 |
End bp | 4020651 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641548740 |
Product | NUDIX hydrolase |
Protein accession | YP_001669845 |
Protein GI | 167034614 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.370258 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTGGC AACCCCACAT CACCGTCGCT ACCATCGTCG AACACGAAGG CAAGTTCCTT TTCGTCGAGG AGTTCAAAGC CAACCAGCAC GTCTTCAACC AACCCGCCGG CCACCTCGAA CCCTTTGAGA CCCTGCCCCA GGCCGCCCTG CGCGAAACCC TGGAAGAAAC TGCCTGGGAA GTCGAGCTCA CCGGCGTTGT CGGCATCTAC CTGTACACCG CCCCCAGCAA CGGCGTGACC TACCAGCGCA TCTGCTTCGC CGCCCGCCCT GTGCGCCACC ACGAAGACCT CGCCCTGGAC AGTGACATCG TCCGCGCCGT ATGGCTGACC CGCGACGAGC TGCTGGCCGA CCCCGCCCGC TGGCGCAGCG AGCTGGTGCC GCGCTGCCTC GACGACTATT TGAACGGCCC GCTGCATAGC CTTGAGCTGC TGCGCGACTG A
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Protein sequence | MSWQPHITVA TIVEHEGKFL FVEEFKANQH VFNQPAGHLE PFETLPQAAL RETLEETAWE VELTGVVGIY LYTAPSNGVT YQRICFAARP VRHHEDLALD SDIVRAVWLT RDELLADPAR WRSELVPRCL DDYLNGPLHS LELLRD
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