| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3616 |
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| Symbol | |
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| ID | 5871408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 4016093 |
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| End bp | 4017349 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641548738 |
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| Product | isocitrate dehydrogenase, NADP-dependent |
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| Protein accession | YP_001669843 |
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| Protein GI | 167034612 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0538] Isocitrate dehydrogenases |
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| TIGRFAM ID | [TIGR00183] isocitrate dehydrogenase, NADP-dependent, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.133268 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGATACC AGAAAATCAA GGTTCCGACC GACGGCGCCA AGATCACCGT CAATGCAGAC
CATTCGCTCA ACGTGCCTGA CAATCCGATC ATTCCGTACA TCGAGGGCGA CGGGATCGGC
ATCGATGTCT CGCCCGTGAT GATCAAGGTG GTCGACGCCG CCGTGCAGAA GGCCTATGGC
GGCAAGCGCA AGATTGCCTG GATGGAGGTG TACGCCGGCG AAAAAGCCAC CCAGGTATAC
GACCAGGACA CCTGGCTGCC GCAGGAAACC CTCGATGCCG TGCGAGATTA CGTGGTGTCG
ATCAAGGGCC CGCTTACCAC CCCGGTCGGT GGCGGCATCC GCTCGCTCAA CGTGGCGCTG
CGCCAGCAGC TCGACCTGTA CGTGTGCCTG CGCCCGGTGC TGTGGTTCCA GGGTGTGCCG
AGCCCGGTGA AAAAGCCGGG CGACGTCGAC ATGGTGATCT TCCGCGAGAA CTCCGAGGAC
ATTTACGCGG GCATCGAGTG GAAGGCCGGC TCGCCCGAGG CGAACAAGGT GATCAAGTTC
CTTAAAGAGG AAATGGGCGT CACCAAGATC CGTTTCGACC AGGACTGCGG CATCGGCGTC
AAGCCGGTAT CCCGCGAGGG CACCAAGCGC CTGGTGCGCA AGGCCCTGCA ATACGTGGTG
GACAATGACC GCGAGTCGCT GACCCTGGTG CACAAGGGCA ACATCATGAA GTTCACCGAA
GGGGCCTTCA AGGACTGGGG CTACGAGGTG GCGCGGGAGG AGTTCGGCGC CGAACTGCTC
GATGGCGGCC CGTGGATGAA GTTCAAGAGC CCCAAGAGTG GCCGCGAGGT CATCGTCAAG
GACGCCATTG CCGACGCCAT GCTGCAGCAG ATTTTGCTGC GTCCGGCCGA GTACGACGTG
ATTGCCACGC TCAACCTCAA CGGTGACTAC CTGTCCGACG CCCTGGCGGC GGAGGTGGGC
GGTATCGGCA TTGCGCCGGG CGCCAACCTG TCCGACACCG TGGCCATGTT CGAGGCCACC
CACGGCACCG CGCCCAAGTA TGCCGGGCAG GACAAGGTCA ACCCGGGCTC GGTGATACTC
TCGGCAGAAA TGATGCTGCG CCACATGGGC TGGACCGAGG CCGCCGACCT GATCATCAAG
GGCACCAACG GCGCGATTGC GGCCAAGACC GTGACCTACG ATTTCGAGCG GCTGATGGAG
GGGGCCCGGC TGGTGAGCAG CTCAGGTTTT GGCGATGAAA TGATCAAGCA CATGTAA
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| Protein sequence | MGYQKIKVPT DGAKITVNAD HSLNVPDNPI IPYIEGDGIG IDVSPVMIKV VDAAVQKAYG
GKRKIAWMEV YAGEKATQVY DQDTWLPQET LDAVRDYVVS IKGPLTTPVG GGIRSLNVAL
RQQLDLYVCL RPVLWFQGVP SPVKKPGDVD MVIFRENSED IYAGIEWKAG SPEANKVIKF
LKEEMGVTKI RFDQDCGIGV KPVSREGTKR LVRKALQYVV DNDRESLTLV HKGNIMKFTE
GAFKDWGYEV AREEFGAELL DGGPWMKFKS PKSGREVIVK DAIADAMLQQ ILLRPAEYDV
IATLNLNGDY LSDALAAEVG GIGIAPGANL SDTVAMFEAT HGTAPKYAGQ DKVNPGSVIL
SAEMMLRHMG WTEAADLIIK GTNGAIAAKT VTYDFERLME GARLVSSSGF GDEMIKHM
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