| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3613 |
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| Symbol | |
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| ID | 5871405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 4012873 |
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| End bp | 4015143 |
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| Gene Length | 2271 bp |
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| Protein Length | 756 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641548735 |
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| Product | ATP-dependent Clp protease, ATP-binding subunit clpA |
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| Protein accession | YP_001669840 |
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| Protein GI | 167034609 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0572282 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAAACC GCGAGCTCGA AGTCACCCTC AATCTGGCCT TCAAGGAGGC CCGTTCGAAG
CGTCATGAGT TCATGACTGT CGAACATCTG CTGCTGGCAC TCCTTGACAA TGAGGCTGCT
GCGACCGTTC TGCGCGCCTG TGGCGCCAAT CTCGACAAAC TCAAGCATGA CCTGCAAGAG
TTCATCGACT CCACAACGCC GCTGATTCCT GTCAACGACG AAGACCGGGA AACCCAGCCG
ACCCTGGGCT TCCAGCGTGT GCTGCAGCGT GCCGTGTTCC ACGTGCAAAG CTCCGGCAAG
CGCGAAGTGA CTGGCGCCAA TGTGCTGGTG GCGATCTTCA GCGAACAGGA AAGCCAGGCC
GTGTTTCTGC TCAAGCAGCA GAGCGTGGCC CGTATCGACG TGGTCAACTA CATCGCCCAT
GGTATCTCCA AGGTGCCAGG GCATGGTTCG CAGTCTGAAA GCGACCAGGA AATGCAGGAC
GAAGAGGGCG GTGAAACCTC CTCTTCGAGC AACCCACTGG ACGCCTATGC CAGCAACCTG
AACGAGCTGG CGCGTGCCGG CCGCATCGAC CCACTGGTCG GCCGCGAGCA GGAAGTGGAG
CGGGTGGCGC AAATCCTTGC CCGTCGGCGC AAGAACAACC CGCTGCTGGT GGGTGAGGCA
GGCGTGGGCA AGACGGCCAT CGCCGAAGGC CTGGCCAAGC GCATCGTCGA CGGCCAGGTG
CCCGATCTGC TGGCGCAGAG CGTGGTGTAT TCCCTCGACC TGGGCGCGCT GCTGGCCGGT
ACCAAATACC GTGGCGACTT CGAGAAGCGT TTCAAGGCGC TGCTCGGTGA GCTGCGCAAG
CGCCCGCAGG CCATCCTGTT CATCGACGAA ATCCACACCA TCATCGGTGC CGGTGCAGCG
TCGGGTGGGG TGATGGATGC CTCCAACCTG CTCAAGCCGC TGCTGTCGTC GGGTGAAATC
CGTTGTATCG GCTCGACCAC CTTCCAGGAG TTTCGCGGCA TCTTCGAGAA GGACCGTGCG
CTGGCACGGC GCTTCCAGAA GGTGGACGTC AGCGAGCCAT CGGTCGAAGA CACCGTGGGC
ATTCTGCGCG GCCTGAAGGG GCGTTTCGAA AGCCACCACA ACATCGAGTA CAGTGACGAA
GCCCTGCGCG CCGCCGCTGA ACTGGCCTCG CGCTACATCA ATGACCGGCA CATGCCGGAC
AAGGCCATCG ACGTAATCGA CGAAGCCGGC GCCTACCAGC GTCTGCAACC GGAGGCCAAC
CGCGTCAAGC GCATCGATGT GCCGCAAGTC GAGGATATCG TCGCCAAGAT CGCGCGGATT
CCGCCGAAGC ATGTCAGCAG TTCCGACAAG GAGCTGCTGC GTAACCTTGA GCGCGACCTG
AAACTGACCG TGTTCGGCCA GGACCAGGCA ATCGACTCGC TGTCTACCGC GATCAAGCTG
TCTCGTGCCG GCCTCAAGTC GCCAGACAAA CCGGTTGGTT CGTTCCTGTT CGCTGGCCCC
ACTGGTGTCG GCAAGACCGA AGCGGCGCGG CAGCTGGCCA AGGCGCTGGG CGTGGAACTG
GTGCGCTTCG ACATGTCCGA GTACATGGAG CGCCACACCG TGTCGCGCCT CATCGGTGCG
CCGCCTGGTT ATGTTGGTTT CGACCAGGGT GGTTTGCTGA CCGAGGCGAT TACCAAACAA
CCGCACTGCG TGTTGCTGCT CGACGAAATC GAGAAGGCTC ACCCGGAAGT CTTCAACCTG
CTGTTGCAGG TGATGGACCA CGGTACCCTG ACCGACAACA ACGGGCGCAA AGCCGACTTC
CGTAACGTGA TCCTGATCAT GACCACCAAC GCCGGTGCCG AAACCGCGGC GCGGGCGTCG
ATCGGCTTCA CTCATCAGGA CCACGCGTCC GATGCCATGG AAGTGATCCG CAAGAGCTTC
ACGCCAGAGT TCCGCAACCG CCTGGATACC ATCATCCAGT TTGGCCGCCT GAGCACAGAG
ACGATCAAAA GCATCGTCGA CAAGTTCCTT ATCGAACTGC AGGCGCAGCT GGAAGACAAG
CGTGTGCTGC TGGAAGTCAG CGATGATGCG CGCGGCTGGC TGGCGGTTTC GGGGTACGAC
GCGCAGATGG GTGCGCGGCC GATGGCGCGG CTGATCCAGG ACAAGATCAA GCGGCCGCTG
GCCGAGGAGA TCTTGTTTGG CGAGCTGGCC GAGCATGGCG GCGTGGTGCA CGTCGACCTG
CGCGATGGCG AACTGGTGTT CGACTTCGAG ACCACGGCTG AGGTCGCGTG A
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| Protein sequence | MLNRELEVTL NLAFKEARSK RHEFMTVEHL LLALLDNEAA ATVLRACGAN LDKLKHDLQE
FIDSTTPLIP VNDEDRETQP TLGFQRVLQR AVFHVQSSGK REVTGANVLV AIFSEQESQA
VFLLKQQSVA RIDVVNYIAH GISKVPGHGS QSESDQEMQD EEGGETSSSS NPLDAYASNL
NELARAGRID PLVGREQEVE RVAQILARRR KNNPLLVGEA GVGKTAIAEG LAKRIVDGQV
PDLLAQSVVY SLDLGALLAG TKYRGDFEKR FKALLGELRK RPQAILFIDE IHTIIGAGAA
SGGVMDASNL LKPLLSSGEI RCIGSTTFQE FRGIFEKDRA LARRFQKVDV SEPSVEDTVG
ILRGLKGRFE SHHNIEYSDE ALRAAAELAS RYINDRHMPD KAIDVIDEAG AYQRLQPEAN
RVKRIDVPQV EDIVAKIARI PPKHVSSSDK ELLRNLERDL KLTVFGQDQA IDSLSTAIKL
SRAGLKSPDK PVGSFLFAGP TGVGKTEAAR QLAKALGVEL VRFDMSEYME RHTVSRLIGA
PPGYVGFDQG GLLTEAITKQ PHCVLLLDEI EKAHPEVFNL LLQVMDHGTL TDNNGRKADF
RNVILIMTTN AGAETAARAS IGFTHQDHAS DAMEVIRKSF TPEFRNRLDT IIQFGRLSTE
TIKSIVDKFL IELQAQLEDK RVLLEVSDDA RGWLAVSGYD AQMGARPMAR LIQDKIKRPL
AEEILFGELA EHGGVVHVDL RDGELVFDFE TTAEVA
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