| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3604 |
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| Symbol | |
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| ID | 5871396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 4003062 |
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| End bp | 4004453 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641548726 |
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| Product | uroporphyrin-III C-methyltransferase |
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| Protein accession | YP_001669831 |
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| Protein GI | 167034600 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0007] Uroporphyrinogen-III methylase
[COG1648] Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) |
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| TIGRFAM ID | [TIGR01469] uroporphyrin-III C-methyltransferase
[TIGR01470] siroheme synthase, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.556509 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTACC TGCCGCTGTT CCACAAGCTG CAGGGCGGCC GCGTGCTGGT CGTCGGCGGC
GGTGAGATCG CCTTGCGCAA GGCGCGCCTG CTGGCCGATG CCGGCGGTGT GCTGCGCGTG
GTGGCGCCGG ACGTCGACGG CCAGTTGGCC GCGTTGGCCC GGGAAGGTGG CGGTGAGGTG
CTGGTGCGTG GCTATCAGGC AGCCGACCTT GTCGGTTGCC GGCTGGTGAT CGCGGCTACC
GACGACCCTG GGCTCAATGC CCAGGTGTCG GCCGATGCGC AGGCCCTCAG CCTGCCGGTC
AACGTGGTGG ATGCGCCGGC CCTGTGCACG GTGATCTTCC CGGCGATCGT CGACCGCTCG
CCGCTGGTGA TTGCGGTTTC CAGCGGTGGT GATGCCCCAG TGCTGGCGCG CTTGATTCGC
GCCAAGCTGG AGGCGTGGAT CCCTTCGGCC TACGGCGAGC TGGCCGGGCT GGCGGCGCGT
TTCCGGCACA AGGTCAAATC CTTGTACCCA GACGTCAACC AGCGCCGCGG CTTCTGGGAA
ACCGTGTTCC AGGGGCCGAT CGCCGAGCGC CAGCTGGCCG GGCAGGGCGC TGAAGCCGAG
CGCCTGTTGC AGGCGATGGT AGAAGGCGCG CCGGTGCAGC AGGGCGGTGA GGTGTACTTG
GTAGGTGCTG GCCCGGGCGA TCCGGACTTG CTGACTTTCC GAGCCTTGCG CCTGATGCAG
CAGGCCGATG TGGTGCTGTA CGACCGCCTG GTGGCGCCAG CTATTATCGA GATGTGCCGG
CGGGATGCCG AGCGCATCTA CGTGGGCAAG CGCCGCGCTG AGCATGCCGT GCCGCAGGAT
CAGATCAACC GCCTGCTGGT CGATCTGGCC CAGCAGGGCA AGCGGGTGCT GCGCCTGAAG
GGTGGCGACC CGTTCATCTT CGGCCGGGGA GGCGAAGAGA TCGAGGAGCT GGCCGAGCAT
GGCATCCCGT TCCAGGTGGT GCCGGGTATC ACGGCGGCCA GTGGCTGTTC CGCTTATGGC
GGCATTCCGC TGACTCACCG CGACTATGCC CAGTCGGTGC GTTTCGTCAC CGGGCACCTG
AAGGATGGCA CCAGCAACTT GCCATGGAAT GATCTGGTGG CGCCAGCGCA GACCTTGGTG
TTCTACATGG GGTTGGTGGG TTTGCCGACC ATTTGCGCCG AGTTGATTCG CCATGGGCGA
GCGGCCAGCA CACCGGCTGC TTTGGTTCAG CAGGGGACGA CGCGAAACCA GCGGGTGTTC
ACCGGTACCC TGGCAGACCT GCCGGGCCTG GTGGCCCAGC ATGAAGTGCA TGCGCCAACC
CTGGTGATTG TCGGGGAAGT GGTGCAGTTG CGTGAAAAGC TGGCCTGGTT CGAAGGTTCG
CAGAACAGCT GA
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| Protein sequence | MNYLPLFHKL QGGRVLVVGG GEIALRKARL LADAGGVLRV VAPDVDGQLA ALAREGGGEV
LVRGYQAADL VGCRLVIAAT DDPGLNAQVS ADAQALSLPV NVVDAPALCT VIFPAIVDRS
PLVIAVSSGG DAPVLARLIR AKLEAWIPSA YGELAGLAAR FRHKVKSLYP DVNQRRGFWE
TVFQGPIAER QLAGQGAEAE RLLQAMVEGA PVQQGGEVYL VGAGPGDPDL LTFRALRLMQ
QADVVLYDRL VAPAIIEMCR RDAERIYVGK RRAEHAVPQD QINRLLVDLA QQGKRVLRLK
GGDPFIFGRG GEEIEELAEH GIPFQVVPGI TAASGCSAYG GIPLTHRDYA QSVRFVTGHL
KDGTSNLPWN DLVAPAQTLV FYMGLVGLPT ICAELIRHGR AASTPAALVQ QGTTRNQRVF
TGTLADLPGL VAQHEVHAPT LVIVGEVVQL REKLAWFEGS QNS
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