| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3594 |
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| Symbol | |
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| ID | 5871385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3995742 |
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| End bp | 3996383 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641548715 |
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| Product | 3-oxoacid CoA-transferase, B subunit |
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| Protein accession | YP_001669821 |
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| Protein GI | 167034590 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
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| TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.575523 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.553848 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCATCA CCAAAAAGCT CTCCCGCACC GAGATGGCCC AACGCGTGGC CGCAGACATT
CAAGAAGGCG CGTACGTAAA CCTGGGCATT GGCGCACCGA CCCTGGTGGC CAACTACCTG
GGCGACAAGG AAGTCTTCCT GCACAGCGAG AACGGCCTGC TGGGCATGGG CCCAAGCCCA
GCGCCGGGCG AGGAAGACGA TGACCTGATC AACGCCGGCA AGCAGCACGT CACCCTGCTG
ACCGGCGGTG CATTCTTCCA CCATGCCGAC TCGTTCTCGA TGATGCGTGG CGGCCACCTG
GACATCGCCG TACTGGGCGC CTTCCAGGTG TCGGTCAAGG GCGACCTGGC CAACTGGCAC
ACCGGTGCCG AAGGTTCGAT CCCCGCCGTA GGCGGTGCGA TGGACCTGGC CACCGGCGCC
CGCCAGGTGT TCGTGATGAT GGACCACCTG ACCAAGACCG GCGAAAGCAA GCTGGTGCCC
GCGTGCACCT ACCCGCTGAC CGGTATTGGT TGCGTCAGCC GCATTTACAC CGACCTGGCC
GTGCTGGAAG TAACGCCTGA AGGCCTGAAA GTGGTCGAGA TTTGCGCGGA CATCGACTTT
GACGAGCTGC AGAAGCTGAG TGGTGTGCCG CTGATCAAGT GA
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| Protein sequence | MTITKKLSRT EMAQRVAADI QEGAYVNLGI GAPTLVANYL GDKEVFLHSE NGLLGMGPSP
APGEEDDDLI NAGKQHVTLL TGGAFFHHAD SFSMMRGGHL DIAVLGAFQV SVKGDLANWH
TGAEGSIPAV GGAMDLATGA RQVFVMMDHL TKTGESKLVP ACTYPLTGIG CVSRIYTDLA
VLEVTPEGLK VVEICADIDF DELQKLSGVP LIK
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