| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3593 |
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| Symbol | |
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| ID | 5871384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3995038 |
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| End bp | 3995733 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641548714 |
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| Product | 3-oxoacid CoA-transferase, A subunit |
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| Protein accession | YP_001669820 |
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| Protein GI | 167034589 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
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| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.310124 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.560913 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATCAATA AAACGTACGA GTCCATCGCC AGCGCGGTGG AAGGAATCAC CGACGGTTCG
ACCATCATGG TCGGTGGCTT CGGCACTGCC GGCATGCCGT CCGAGCTGAT CGATGGCCTG
ATCGCAACCG GTGCCCGCGA CCTGACCATC ATCAGCAACA ACGCCGGCAA CGGCGAGATC
GGCCTGGCCG CCTTGCTCAT GGCAGGCAGC GTGCGCAAGG TGGTCTGCTC GTTCCCGCGC
CAATCCGACT CCTACGTGTT CGACGAACTG TACCGGGCCG GCAAGATCGA ATTGGAAGTG
GTGCCGCAAG GCAACCTGGC CGAGCGTATC CGCGCAGCCG GTTCGGGCAT CGGTGCGTTC
TTCTCGCCGA CCGGCTACGG CACCCTGCTG GCCGAAGGCA AGGAAACCCG TGAAATCGAT
GGCCGCATGT ACGTGCTGGA AATGCCATTG CACGCCGACT TCGCACTGAT CAAGGCGCAC
AAGGGTGACC GTTGGGGCAA CCTGACCTAC CGCAAAGCCG CGCGCAACTT CGGGCCGATC
ATGGCCATGG CCGCCAAGAC TGCCATCGCC CAGGTCGACC AGGTTGTCGA ACTCGGTGAA
CTGGACCCGG AACACATCAT CACTCCGGGT ATCTTCGTCC AGCGCGTGGT CGCCGTCACC
GGCGCTGCCG CTTCTTCGAT TGCCAAAGCT GTCTGA
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| Protein sequence | MINKTYESIA SAVEGITDGS TIMVGGFGTA GMPSELIDGL IATGARDLTI ISNNAGNGEI
GLAALLMAGS VRKVVCSFPR QSDSYVFDEL YRAGKIELEV VPQGNLAERI RAAGSGIGAF
FSPTGYGTLL AEGKETREID GRMYVLEMPL HADFALIKAH KGDRWGNLTY RKAARNFGPI
MAMAAKTAIA QVDQVVELGE LDPEHIITPG IFVQRVVAVT GAAASSIAKA V
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