| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3588 |
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| Symbol | |
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| ID | 5871379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3989682 |
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| End bp | 3990587 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641548709 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001669815 |
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| Protein GI | 167034584 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.443778 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTAC GCGATCTAGA CCTGAACCTG CTTCTGGTTT TCAACCAGCT ACTGATCGAC
CGCAAAGTTT CGACCGCCGC CGAAAACCTG AGCCTGACCC AACCGGCGAT GAGCAATGCC
CTGAAGCGCC TGCGCACTGT GCTGCAGGAC GAGTTGTTCG TGCGCACCTA CCAGGGCATG
GAGCCCACTC CTTACGCCCT GCAGTTGGCG GAGCCGATTA CCACAGCCAT CCAAACGCTA
CGCGACGCAT TCAGCCGGCA GGACACTTTC GACCCGGCCA CCAGCAATCG CCGCTTCACC
ATGGCTATGA CCGACATTGG CGAGATCTAC TTCATGCCCA AGCTGATGGA CGCGTTTGCC
GCACTGGCGC CCGGCTGCAC CATCAGCACA TTGCGCAACT CGGCTGACAC CCTGGCCGAA
GGGCTGCAGA ACGGCACTAT TGAGCTGGCG GTTGGCCTGT TACCGCATCT GCAGGCGGGG
TTCTTTCAAC GGCGGCTGTT TCACCATCGC TATGTGTGCC TGTGCCGTAA AGGGCACCCC
GCTACGCAGC AGCCCCTGAC CGTGGAGAGC TTCATGAGCT TCGAGCATGT GAATGTAGTG
GCGGCCAATA CCGGGCATGG CGAGGTCGAC ACGTATTACG CGCGGGCTGG GGTGGTGCGC
AACATTCGCC TGGAAGTGCC GCACTTCGTG GCGGTGGGGC ACATCCTGCA GCACAGTGAT
TTGTTGGCAA CGGTGCCAGA GCGGTTTGCC GCCAGTTGCG AGGCACCGTT CGGGTTGAGC
GTTATGCCAC CCCCGGTGGC ATTGCCGAAC ATCGAAATCA ACCTGTTCTG GCATGGGCGG
TACAACAAGG ACCCGGCCAA CCGCTGGCTT CGACAATTGA TGTTCGACTT GTTCTCGGAT
GCATGA
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| Protein sequence | MDLRDLDLNL LLVFNQLLID RKVSTAAENL SLTQPAMSNA LKRLRTVLQD ELFVRTYQGM
EPTPYALQLA EPITTAIQTL RDAFSRQDTF DPATSNRRFT MAMTDIGEIY FMPKLMDAFA
ALAPGCTIST LRNSADTLAE GLQNGTIELA VGLLPHLQAG FFQRRLFHHR YVCLCRKGHP
ATQQPLTVES FMSFEHVNVV AANTGHGEVD TYYARAGVVR NIRLEVPHFV AVGHILQHSD
LLATVPERFA ASCEAPFGLS VMPPPVALPN IEINLFWHGR YNKDPANRWL RQLMFDLFSD
A
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