Gene PputGB1_3580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3580 
Symbol 
ID5871371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp3979146 
End bp3980198 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content65% 
IMG OID641548701 
Producthypothetical protein 
Protein accessionYP_001669807 
Protein GI167034576 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2309] Leucyl aminopeptidase (aminopeptidase T) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.792546 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGTGA GCAATGCACA ACTGACCCAG ATGTTCGAGC ACGTACTGAA GCTGTCCCGC 
GTGGACGAGA CGCAAAGCGT GGCCGTGCTC AAGAGCCACT ACTCCGACCC ACGCACGGTC
AACGCCGCAA TGGAGGCCGC GCAGCGCCTG AAGGCCAAGG TGTATGCGGT AGAGCTGCCG
GCGTTCAACC ACCCGACCGC CATGGGCAAC GACATGACCG CCTACTGCGG CGACACCGCG
CTCACCGGCA ACCTGGCGGC GCAGCGGGCG CTGGAGGCAG CTGACCTGGT GGTCGACACC
ATGATGCTGC TGCACTCGCC TGAGCAGGAG CAGATCCTCA AGACCGGCAC GCGCATCCTG
CTGGCCGTGG AGCCGCCAGA AGTGCTGGCG CGCATGCTGC CGAGCGAAGA CGACAAACGT
CGGGTACTGG CCGCCGAAAC CCTGCTGAAA CAGGCGCGCA GCCTGCATGT ACGGTCCAAG
GCCGGCAGCG ATTTCCACGC CCCGCTTGGC CAGTACCCGG CCGTGACCGA GTACGGTTAT
GCCGACGAGC CGGGGCGCTG GGACCACTGG CCCAGCGGCT TTTTGTTCAC CTGGCCGAAC
GAGGACAGCG CCGAGGGCAC GCTGGTGCTG GACGTGGGCG ACATCATCCT GCCGTTCAAG
AACTACTGCC GCGAGCGCAT TACCCTGGAG ATCGAAAAAG GCTTCATCAC CGGCATCCAT
GGCGGTTTCG AGGCCGAGTA CCTGCGCGAC TACATGAAGT ACTTCAATGA CCCCGAGGTG
TACGGCATCT CGCACATCGG CTGGGGCCTG CAGCCGCGCG CGCAGTGGAC AGCCATGGGC
CTGCACGACC GCAACGACGG CATGTGCATG GATGCCCGTG CGTTCTACGG CAACTTCCTG
TTCTCCACCG GCCCCAACAC CGAGGTCGGC GGCAAACGCA AGACCCCGTG CCACCTGGAC
ATCCCACTGC GCAACTGCGA CATCTACCTG GATGACAAGG CCGTGGTGTT GGCGGGCGAT
GTAGTCGCAC CAGAGGAGTC GCGCGCGCGA TAG
 
Protein sequence
MPVSNAQLTQ MFEHVLKLSR VDETQSVAVL KSHYSDPRTV NAAMEAAQRL KAKVYAVELP 
AFNHPTAMGN DMTAYCGDTA LTGNLAAQRA LEAADLVVDT MMLLHSPEQE QILKTGTRIL
LAVEPPEVLA RMLPSEDDKR RVLAAETLLK QARSLHVRSK AGSDFHAPLG QYPAVTEYGY
ADEPGRWDHW PSGFLFTWPN EDSAEGTLVL DVGDIILPFK NYCRERITLE IEKGFITGIH
GGFEAEYLRD YMKYFNDPEV YGISHIGWGL QPRAQWTAMG LHDRNDGMCM DARAFYGNFL
FSTGPNTEVG GKRKTPCHLD IPLRNCDIYL DDKAVVLAGD VVAPEESRAR