Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3580 |
Symbol | |
ID | 5871371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 3979146 |
End bp | 3980198 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641548701 |
Product | hypothetical protein |
Protein accession | YP_001669807 |
Protein GI | 167034576 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2309] Leucyl aminopeptidase (aminopeptidase T) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.792546 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGTGA GCAATGCACA ACTGACCCAG ATGTTCGAGC ACGTACTGAA GCTGTCCCGC GTGGACGAGA CGCAAAGCGT GGCCGTGCTC AAGAGCCACT ACTCCGACCC ACGCACGGTC AACGCCGCAA TGGAGGCCGC GCAGCGCCTG AAGGCCAAGG TGTATGCGGT AGAGCTGCCG GCGTTCAACC ACCCGACCGC CATGGGCAAC GACATGACCG CCTACTGCGG CGACACCGCG CTCACCGGCA ACCTGGCGGC GCAGCGGGCG CTGGAGGCAG CTGACCTGGT GGTCGACACC ATGATGCTGC TGCACTCGCC TGAGCAGGAG CAGATCCTCA AGACCGGCAC GCGCATCCTG CTGGCCGTGG AGCCGCCAGA AGTGCTGGCG CGCATGCTGC CGAGCGAAGA CGACAAACGT CGGGTACTGG CCGCCGAAAC CCTGCTGAAA CAGGCGCGCA GCCTGCATGT ACGGTCCAAG GCCGGCAGCG ATTTCCACGC CCCGCTTGGC CAGTACCCGG CCGTGACCGA GTACGGTTAT GCCGACGAGC CGGGGCGCTG GGACCACTGG CCCAGCGGCT TTTTGTTCAC CTGGCCGAAC GAGGACAGCG CCGAGGGCAC GCTGGTGCTG GACGTGGGCG ACATCATCCT GCCGTTCAAG AACTACTGCC GCGAGCGCAT TACCCTGGAG ATCGAAAAAG GCTTCATCAC CGGCATCCAT GGCGGTTTCG AGGCCGAGTA CCTGCGCGAC TACATGAAGT ACTTCAATGA CCCCGAGGTG TACGGCATCT CGCACATCGG CTGGGGCCTG CAGCCGCGCG CGCAGTGGAC AGCCATGGGC CTGCACGACC GCAACGACGG CATGTGCATG GATGCCCGTG CGTTCTACGG CAACTTCCTG TTCTCCACCG GCCCCAACAC CGAGGTCGGC GGCAAACGCA AGACCCCGTG CCACCTGGAC ATCCCACTGC GCAACTGCGA CATCTACCTG GATGACAAGG CCGTGGTGTT GGCGGGCGAT GTAGTCGCAC CAGAGGAGTC GCGCGCGCGA TAG
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Protein sequence | MPVSNAQLTQ MFEHVLKLSR VDETQSVAVL KSHYSDPRTV NAAMEAAQRL KAKVYAVELP AFNHPTAMGN DMTAYCGDTA LTGNLAAQRA LEAADLVVDT MMLLHSPEQE QILKTGTRIL LAVEPPEVLA RMLPSEDDKR RVLAAETLLK QARSLHVRSK AGSDFHAPLG QYPAVTEYGY ADEPGRWDHW PSGFLFTWPN EDSAEGTLVL DVGDIILPFK NYCRERITLE IEKGFITGIH GGFEAEYLRD YMKYFNDPEV YGISHIGWGL QPRAQWTAMG LHDRNDGMCM DARAFYGNFL FSTGPNTEVG GKRKTPCHLD IPLRNCDIYL DDKAVVLAGD VVAPEESRAR
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